RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 LARP1Q6PKG0 1096 aaKnown RBP9.82□□□□□ -0.84
SKP1-208ENST00000521216 ATP5J2-PTCD1G3V325 749 aa9.81□□□□□ -0.84
SKP1-208ENST00000521216 ADD1P35611 737 aaKnown RBP9.81□□□□□ -0.84
SKP1-208ENST00000521216 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
SKP1-208ENST00000521216 GTF2IP78347 998 aa9.81□□□□□ -0.84
SKP1-208ENST00000521216 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
SKP1-208ENST00000521216 NRG2O14511 850 aaPredicted RBP9.8□□□□□ -0.84
SKP1-208ENST00000521216 LILRA1O75019 489 aa9.8□□□□□ -0.84
SKP1-208ENST00000521216 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
SKP1-208ENST00000521216 TIMP2P16035 220 aa9.8□□□□□ -0.84
SKP1-208ENST00000521216 OGFOD1Q8N543 542 aa9.8□□□□□ -0.84
SKP1-208ENST00000521216 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
SKP1-208ENST00000521216 ATP1A2P50993 1020 aa9.79□□□□□ -0.84
SKP1-208ENST00000521216 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
SKP1-208ENST00000521216 KLF16Q9BXK1 252 aaPredicted RBP9.79□□□□□ -0.84
SKP1-208ENST00000521216 DNAAF2Q9NVR5 837 aaKnown RBP9.79□□□□□ -0.84
SKP1-208ENST00000521216 SRPK2P78362 688 aaKnown RBP9.78□□□□□ -0.84
SKP1-208ENST00000521216 CLDN10P78369 228 aa9.78□□□□□ -0.84
SKP1-208ENST00000521216 CRTC2Q53ET0 693 aaPredicted RBP9.78□□□□□ -0.84
SKP1-208ENST00000521216 IRX2Q9BZI1 471 aaPredicted RBP9.78□□□□□ -0.84
SKP1-208ENST00000521216 OSBPL3Q9H4L5 887 aa9.78□□□□□ -0.84
SKP1-208ENST00000521216 CYP2U1Q7Z449 544 aa9.77□□□□□ -0.85
SKP1-208ENST00000521216 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
SKP1-208ENST00000521216 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
SKP1-208ENST00000521216 DGAT1O75907 488 aa9.76□□□□□ -0.85
SKP1-208ENST00000521216 RELBQ01201 579 aa9.76□□□□□ -0.85
SKP1-208ENST00000521216 LAPTM4AQ15012 233 aa9.76□□□□□ -0.85
SKP1-208ENST00000521216 PCDHGA11Q9Y5H2 935 aa9.76□□□□□ -0.85
SKP1-208ENST00000521216 USP17L15C9J2P7 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L10C9JJH3 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L13C9JLJ4 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L12C9JPN9 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L11C9JVI0 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L21D6R901 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L18D6R9N7 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L22D6RA61 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L17D6RBQ6 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L19D6RCP7 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L20D6RJB6 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 STAU1O95793 577 aaKnown RBP9.75□□□□□ -0.85
SKP1-208ENST00000521216 ADH1AP07327 375 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 USP17L24Q0WX57 530 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 KIAA1024Q9UPX6 916 aa9.75□□□□□ -0.85
SKP1-208ENST00000521216 FAM196BA6NMK8 535 aa9.74□□□□□ -0.85
SKP1-208ENST00000521216 ZBTB7BO15156 539 aaPredicted RBP9.74□□□□□ -0.85
SKP1-208ENST00000521216 PTK7Q13308 1070 aa9.74□□□□□ -0.85
SKP1-208ENST00000521216 CCDC102BQ68D86 513 aa9.74□□□□□ -0.85
SKP1-208ENST00000521216 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
SKP1-208ENST00000521216 RAB6BQ9NRW1 208 aa9.74□□□□□ -0.85
SKP1-208ENST00000521216 NOVA2Q9UNW9 492 aaKnown RBP9.74□□□□□ -0.85
SKP1-208ENST00000521216 ATG7O95352 703 aa9.73□□□□□ -0.85
SKP1-208ENST00000521216 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
SKP1-208ENST00000521216 DPYDQ12882 1025 aa9.73□□□□□ -0.85
SKP1-208ENST00000521216 Q6ZVU0 165 aa9.73□□□□□ -0.85
SKP1-208ENST00000521216 ZNF395Q9H8N7 513 aaPredicted RBP9.73□□□□□ -0.85
SKP1-208ENST00000521216 ARHGEF10LQ9HCE6 1279 aa9.73□□□□□ -0.85
SKP1-208ENST00000521216 AXIN1O15169 862 aa9.72□□□□□ -0.85
SKP1-208ENST00000521216 UPP2O95045 317 aa9.72□□□□□ -0.85
SKP1-208ENST00000521216 AVPP01185 164 aa9.72□□□□□ -0.85
SKP1-208ENST00000521216 ANKMY2Q8IV38 441 aa9.72□□□□□ -0.85
SKP1-208ENST00000521216 FAM200AQ8TCP9 573 aa9.72□□□□□ -0.85
SKP1-208ENST00000521216 SFI1A8K8P3 1242 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 MEN1O00255 615 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 GNRH1P01148 92 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 GDF10P55107 478 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 C6orf118Q5T5N4 469 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 MEIOBQ8N635 442 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■■■■ 28.6
SKP1-208ENST00000521216 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
SKP1-208ENST00000521216 A0A1W2PRU2 124 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 BMP2P12643 396 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 PTGIRP43119 386 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 ESCO1Q5FWF5 840 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 RETREG2Q8NC44 543 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 STK32AQ8WU08 396 aa9.7□□□□□ -0.86
SKP1-208ENST00000521216 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
SKP1-208ENST00000521216 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 BMP1P13497 986 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 SEC13P55735 322 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 SIX5Q8N196 739 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
SKP1-208ENST00000521216 NLRP3Q96P20 1036 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
SKP1-208ENST00000521216 SCNN1DP51172 638 aa9.68□□□□□ -0.86
SKP1-208ENST00000521216 ELOAQ14241 798 aaKnown RBP9.68□□□□□ -0.86
SKP1-208ENST00000521216 HOMEZQ8IX15 550 aa9.68□□□□□ -0.86
SKP1-208ENST00000521216 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
SKP1-208ENST00000521216 HINFPQ9BQA5 517 aa9.68□□□□□ -0.86
SKP1-208ENST00000521216 ZNF358Q9NW07 568 aa9.68□□□□□ -0.86
SKP1-208ENST00000521216 CARNS1A5YM72 827 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 TMEM229AB2RXF0 380 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 LGR5O75473 907 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 INHAP05111 366 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 SCARF1Q14162 830 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 TMEM164Q5U3C3 297 aa9.67□□□□□ -0.86
SKP1-208ENST00000521216 MRPL14Q6P1L8 145 aaKnown RBP9.67□□□□□ -0.86
SKP1-208ENST00000521216 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms