RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
SMAD1-215ENST00000515385 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
SMAD1-215ENST00000515385 WDR33Q9C0J8 1336 aaKnown RBP15.46■□□□□ 0.06
SMAD1-215ENST00000515385 FAM177BA6PVY3 158 aa15.45■□□□□ 0.06
SMAD1-215ENST00000515385 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
SMAD1-215ENST00000515385 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
SMAD1-215ENST00000515385 SECISBP2LQ93073 1101 aaKnown RBP15.45■□□□□ 0.06
SMAD1-215ENST00000515385 TET3O43151 1660 aa15.45■□□□□ 0.06
SMAD1-215ENST00000515385 C17orf53Q8N3J3 647 aaPredicted RBP15.45■□□□□ 0.06
SMAD1-215ENST00000515385 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
SMAD1-215ENST00000515385 TIGD1Q96MW7 591 aa15.45■□□□□ 0.06
SMAD1-215ENST00000515385 ZBTB7CA1YPR0 619 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 NCBP1Q09161 790 aaKnown RBP15.44■□□□□ 0.06
SMAD1-215ENST00000515385 API5Q9BZZ5 524 aaKnown RBP15.44■□□□□ 0.06
SMAD1-215ENST00000515385 TSPYL1Q9H0U9 437 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 USP48Q86UV5 1035 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 C1orf115Q9H7X2 142 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 CALCOCO1Q9P1Z2 691 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 PAXBP1Q9Y5B6 917 aa15.44■□□□□ 0.06
SMAD1-215ENST00000515385 SDSP20132 328 aa15.43■□□□□ 0.06
SMAD1-215ENST00000515385 MCCP23508 829 aa15.43■□□□□ 0.06
SMAD1-215ENST00000515385 ANAPC15P60006 121 aa15.43■□□□□ 0.06
SMAD1-215ENST00000515385 IRX3P78415 501 aaPredicted RBP15.43■□□□□ 0.06
SMAD1-215ENST00000515385 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
SMAD1-215ENST00000515385 RGS22Q8NE09 1264 aa15.43■□□□□ 0.06
SMAD1-215ENST00000515385 ZC3H13Q5T200 1668 aaKnown RBP15.43■□□□□ 0.06
SMAD1-215ENST00000515385 U2SURPO15042 1029 aaKnown RBP15.42■□□□□ 0.06
SMAD1-215ENST00000515385 NEK4P51957 841 aa15.42■□□□□ 0.06
SMAD1-215ENST00000515385 CHMP4AQ9BY43 222 aa15.42■□□□□ 0.06
SMAD1-215ENST00000515385 COL3A1P02461 1466 aaPredicted RBP15.42■□□□□ 0.06
SMAD1-215ENST00000515385 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
SMAD1-215ENST00000515385 TERF2Q15554 542 aa15.42■□□□□ 0.06
SMAD1-215ENST00000515385 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SMAD1-215ENST00000515385 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SMAD1-215ENST00000515385 ADGRF5Q8IZF2 1346 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 VGLL3A8MV65 326 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 UBE2HP62256 183 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 KRT222Q8N1A0 295 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 CHAMP1Q96JM3 812 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 PYCARDQ9ULZ3 195 aa15.41■□□□□ 0.06
SMAD1-215ENST00000515385 GADD45BO75293 160 aaPredicted RBP15.4■□□□□ 0.06
SMAD1-215ENST00000515385 VAMP4O75379 141 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
SMAD1-215ENST00000515385 KCNJ4P48050 445 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 IL17RAQ96F46 866 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 KCNF1Q9H3M0 494 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMAD1-215ENST00000515385 RTL1A6NKG5 1358 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 DEPDC5O75140 1603 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 IGSF3O75054 1194 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
SMAD1-215ENST00000515385 MPNDQ8N594 471 aa15.4■□□□□ 0.06
SMAD1-215ENST00000515385 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
SMAD1-215ENST00000515385 IFT172Q9UG01 1749 aa15.39■□□□□ 0.05
SMAD1-215ENST00000515385 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
SMAD1-215ENST00000515385 KIF18AQ8NI77 898 aa15.39■□□□□ 0.05
SMAD1-215ENST00000515385 FUCA2Q9BTY2 467 aa15.39■□□□□ 0.05
SMAD1-215ENST00000515385 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
SMAD1-215ENST00000515385 MMP14P50281 582 aa15.38■□□□□ 0.05
SMAD1-215ENST00000515385 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 TULP2O00295 520 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 EPB41L2O43491 1005 aaKnown RBP15.37■□□□□ 0.05
SMAD1-215ENST00000515385 FCHSD2O94868 740 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 DHX37Q8IY37 1157 aaKnown RBP15.37■□□□□ 0.05
SMAD1-215ENST00000515385 CCDC112Q8NEF3 446 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
SMAD1-215ENST00000515385 OSBPL3Q9H4L5 887 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 FAM53CQ9NYF3 392 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 RPAP1Q9BWH6 1393 aaPredicted RBP15.37■□□□□ 0.05
SMAD1-215ENST00000515385 RGS12O14924 1447 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 VWDEQ8N2E2 1590 aa15.37■□□□□ 0.05
SMAD1-215ENST00000515385 GNAI1P63096 354 aa15.36■□□□□ 0.05
SMAD1-215ENST00000515385 EVC2Q86UK5 1308 aa15.36■□□□□ 0.05
SMAD1-215ENST00000515385 SSH2Q76I76 1423 aa15.36■□□□□ 0.05
SMAD1-215ENST00000515385 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
SMAD1-215ENST00000515385 FAM135BQ49AJ0 1406 aa15.35■□□□□ 0.05
SMAD1-215ENST00000515385 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
SMAD1-215ENST00000515385 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
SMAD1-215ENST00000515385 KIF1BO60333 1816 aa15.35■□□□□ 0.05
SMAD1-215ENST00000515385 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
SMAD1-215ENST00000515385 SLFNL1Q499Z3 407 aa15.34■□□□□ 0.05
SMAD1-215ENST00000515385 SMARCA5O60264 1052 aaPredicted RBP15.34■□□□□ 0.05
SMAD1-215ENST00000515385 CCDC192P0DO97 292 aa15.34■□□□□ 0.05
SMAD1-215ENST00000515385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.34■□□□□ 0.05
SMAD1-215ENST00000515385 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.34■□□□□ 0.05
SMAD1-215ENST00000515385 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
SMAD1-215ENST00000515385 PNPLA6Q8IY17 1366 aa15.33■□□□□ 0.05
SMAD1-215ENST00000515385 TNNT1P13805 278 aa15.33■□□□□ 0.04
SMAD1-215ENST00000515385 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
SMAD1-215ENST00000515385 RNF20Q5VTR2 975 aa15.33■□□□□ 0.04
SMAD1-215ENST00000515385 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
SMAD1-215ENST00000515385 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
SMAD1-215ENST00000515385 SPAG9O60271 1321 aaKnown RBP15.33■□□□□ 0.04
SMAD1-215ENST00000515385 SRCIN1Q9C0H9 1055 aa15.32■□□□□ 0.04
SMAD1-215ENST00000515385 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
SMAD1-215ENST00000515385 FANCAO15360 1455 aa15.32■□□□□ 0.04
SMAD1-215ENST00000515385 PLCH2O75038 1416 aa15.32■□□□□ 0.04
SMAD1-215ENST00000515385 ZSCAN22P10073 491 aaPredicted RBP15.32■□□□□ 0.04
SMAD1-215ENST00000515385 TRAK1Q9UPV9 953 aa15.32■□□□□ 0.04
SMAD1-215ENST00000515385 ABCC1P33527 1531 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms