RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 GPHNQ9NQX3 736 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC11-209ENST00000512476 CABLES1Q8TDN4 633 aa8.05□□□□□ -1.12
TRAPPC11-209ENST00000512476 RNPC3Q96LT9 517 aaKnown RBP8.05□□□□□ -1.12
TRAPPC11-209ENST00000512476 ANP32CO43423 234 aa8.05□□□□□ -1.12
TRAPPC11-209ENST00000512476 PODNQ7Z5L7 613 aa8.05□□□□□ -1.12
TRAPPC11-209ENST00000512476 TOP2AP11388 1531 aaKnown RBP8.05□□□□□ -1.12
TRAPPC11-209ENST00000512476 CD53P19397 219 aa8.04□□□□□ -1.12
TRAPPC11-209ENST00000512476 EIF4G1Q04637 1599 aaKnown RBP8.04□□□□□ -1.12
TRAPPC11-209ENST00000512476 EPAS1Q99814 870 aa8.04□□□□□ -1.12
TRAPPC11-209ENST00000512476 PDZRN3Q9UPQ7 1066 aa8.04□□□□□ -1.12
TRAPPC11-209ENST00000512476 GOLGA6CA6NDK9 693 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 GOLGA6BA6NDN3 693 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 GOLGA6DP0CG33 693 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 RACK1P63244 317 aaKnown RBP8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 ARHGAP4P98171 946 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 GOLGA6AQ9NYA3 693 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 ICE2Q659A1 982 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 SPIRE2Q8WWL2 714 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 SETDB2Q96T68 719 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 ATAD2BQ9ULI0 1458 aa8.03□□□□□ -1.12
TRAPPC11-209ENST00000512476 LGR5O75473 907 aa8.02□□□□□ -1.12
TRAPPC11-209ENST00000512476 CAPN12Q6ZSI9 719 aa8.02□□□□□ -1.12
TRAPPC11-209ENST00000512476 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 SOCS7O14512 581 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 FGAP02671 866 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 TERF1P54274 439 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 C8orf48Q96LL4 319 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 LRRC27Q9C0I9 530 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 TSPYL2Q9H2G4 693 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 SH3BP1Q9Y3L3 701 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 SMARCA2P51531 1590 aa8.02□□□□□ -1.13
TRAPPC11-209ENST00000512476 DYTNA2CJ06 578 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 MOXD2PA6NHM9 499 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 KANK3Q6NY19 840 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 NGDNQ8NEJ9 315 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 METTL3Q86U44 580 aaKnown RBP8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 RNF34Q969K3 372 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 INTUQ9ULD6 942 aa8.01□□□□□ -1.13
TRAPPC11-209ENST00000512476 LILRB3O75022 631 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 LDHCP07864 332 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 XRCC5P13010 732 aaKnown RBP8□□□□□ -1.13
TRAPPC11-209ENST00000512476 SAFB2Q14151 953 aaKnown RBP eCLIP8□□□□□ -1.13
TRAPPC11-209ENST00000512476 ANKRD13DQ6ZTN6 518 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 PDILTQ8N807 584 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
TRAPPC11-209ENST00000512476 AVENQ9NQS1 362 aaPredicted RBP8□□□□□ -1.13
TRAPPC11-209ENST00000512476 COPB2P35606 906 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 ARID5AQ03989 594 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 LONRF1Q17RB8 773 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 LRRN4Q8WUT4 740 aa8□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L10C9JJH3 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L12C9JPN9 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L21D6R901 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 ENPP3O14638 875 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 VIL1P09327 827 aaKnown RBP7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 PDE3BQ13370 1112 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 SIM2Q14190 667 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 JAMLQ86YT9 394 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 GLYCTKQ8IVS8 523 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 CEP63Q96MT8 703 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 PARP2Q9UGN5 583 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L3A6NCW0 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L4A6NCW7 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 NRDCO43847 1150 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 FGRP09769 529 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 RSBN1LQ6PCB5 846 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L2Q6R6M4 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 USP17L1Q7RTZ2 530 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 MUC3BQ9H195 1237 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 INPP5FQ9Y2H2 1132 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 FRMD4BQ9Y2L6 1034 aa7.99□□□□□ -1.13
TRAPPC11-209ENST00000512476 ICMTO60725 284 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 RRM1P23921 792 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 CDKN1CP49918 316 aaPredicted RBP7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 JADE2Q9NQC1 790 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 SEPT3Q9UH03 358 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 SCINQ9Y6U3 715 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 PRMT3O60678 531 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 PTK7Q13308 1070 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 EMILIN1Q9Y6C2 1016 aa7.98□□□□□ -1.13
TRAPPC11-209ENST00000512476 BAZ1BQ9UIG0 1483 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms