RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SUZ12Q15022 739 aaKnown RBP7.66□□□□□ -1.18
SMARCA5-202ENST00000508573 PCMTD1Q96MG8 357 aaPredicted RBP7.66□□□□□ -1.18
SMARCA5-202ENST00000508573 PCDHB9Q9Y5E1 797 aa7.66□□□□□ -1.18
SMARCA5-202ENST00000508573 RNF225M0QZC1 329 aaPredicted RBP7.65□□□□□ -1.18
SMARCA5-202ENST00000508573 ARHGEF15O94989 841 aa7.65□□□□□ -1.18
SMARCA5-202ENST00000508573 IRS1P35568 1242 aa7.65□□□□□ -1.18
SMARCA5-202ENST00000508573 TMEM259Q4ZIN3 620 aa7.65□□□□□ -1.18
SMARCA5-202ENST00000508573 TRIM34Q9BYJ4 488 aa7.65□□□□□ -1.18
SMARCA5-202ENST00000508573 MEN1O00255 615 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 ADAMTS2O95450 1211 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 RNF144AP50876 292 aaPredicted RBP7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 LYPD4Q6UWN0 246 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 SEPT12Q8IYM1 358 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 TRIM52Q96A61 297 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 CUEDC1Q9NWM3 386 aaPredicted RBP7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 PODXL2Q9NZ53 605 aa7.64□□□□□ -1.19
SMARCA5-202ENST00000508573 ZBBXA8MT70 800 aa7.63□□□□□ -1.19
SMARCA5-202ENST00000508573 ATP5J2-PTCD1G3V325 749 aa7.63□□□□□ -1.19
SMARCA5-202ENST00000508573 IL27Q8NEV9 243 aa7.63□□□□□ -1.19
SMARCA5-202ENST00000508573 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
SMARCA5-202ENST00000508573 RIPOR1Q6ZS17 1223 aa7.62□□□□□ -1.19
SMARCA5-202ENST00000508573 A0A1W2PRU2 124 aa7.61□□□□□ -1.19
SMARCA5-202ENST00000508573 LOC100996750A0A140TA64 210 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 GPR25O00155 361 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 FBXO45P0C2W1 286 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 MAP3K10Q02779 954 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 POU4F2Q12837 409 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 GAS6Q14393 721 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 DBN1Q16643 649 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 NLRP3Q96P20 1036 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 GAS2L1Q99501 681 aaPredicted RBP7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 KRTAP4-6Q9BYQ5 205 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 GOPCQ9HD26 462 aa7.6□□□□□ -1.19
SMARCA5-202ENST00000508573 CELA2BP08218 269 aaPredicted RBP7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 SLC27A3Q5K4L6 730 aa7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 RNF20Q5VTR2 975 aa7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 CC2D2BQ6DHV5 1058 aa7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 C14orf37Q86TY3 774 aa7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 ESF1Q9H501 851 aaKnown RBP7.59□□□□□ -1.19
SMARCA5-202ENST00000508573 GPAT2Q6NUI2 795 aa7.58□□□□□ -1.2
SMARCA5-202ENST00000508573 TRIM22Q8IYM9 498 aa7.58□□□□□ -1.2
SMARCA5-202ENST00000508573 GJD4Q96KN9 370 aaPredicted RBP7.58□□□□□ -1.2
SMARCA5-202ENST00000508573 ENAMQ9NRM1 1142 aa7.58□□□□□ -1.2
SMARCA5-202ENST00000508573 GPC1P35052 558 aa7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 NEUROD2Q15784 382 aa7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 KANK3Q6NY19 840 aa7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 CCDC125Q86Z20 511 aa7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 ZNF837Q96EG3 531 aaPredicted RBP7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 GMCL1Q96IK5 515 aa7.57□□□□□ -1.2
SMARCA5-202ENST00000508573 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
SMARCA5-202ENST00000508573 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
SMARCA5-202ENST00000508573 MBIPQ9NS73 344 aa7.56□□□□□ -1.2
SMARCA5-202ENST00000508573 DYRK1BQ9Y463 629 aa7.56□□□□□ -1.2
SMARCA5-202ENST00000508573 H7C1W4 665 aa7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 MCCD1P59942 119 aaPredicted RBP7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 NR1H3Q13133 447 aa7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 DNMT3AQ9Y6K1 912 aaPredicted RBP7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 IGF1RP08069 1367 aa7.55□□□□□ -1.2
SMARCA5-202ENST00000508573 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
SMARCA5-202ENST00000508573 SCTRP47872 440 aa7.54□□□□□ -1.2
SMARCA5-202ENST00000508573 NEDD1Q8NHV4 660 aa7.54□□□□□ -1.2
SMARCA5-202ENST00000508573 TRERF1Q96PN7 1200 aa7.54□□□□□ -1.2
SMARCA5-202ENST00000508573 NBPF10Q6P3W6 841 aaKnown RBP7.53□□□□□ -1.2
SMARCA5-202ENST00000508573 CYP2U1Q7Z449 544 aa7.53□□□□□ -1.2
SMARCA5-202ENST00000508573 NBPF15Q8N660 670 aa7.53□□□□□ -1.2
SMARCA5-202ENST00000508573 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
SMARCA5-202ENST00000508573 ZNF330Q9Y3S2 320 aaPredicted RBP7.53□□□□□ -1.2
SMARCA5-202ENST00000508573 IGHA1P01876 353 aa7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 BCRP11274 1271 aa7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 CLN3Q13286 438 aa7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 BEND7Q8N7W2 519 aaPredicted RBP7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 OSBPL3Q9H4L5 887 aa7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 ARHGEF10LQ9HCE6 1279 aa7.52□□□□□ -1.21
SMARCA5-202ENST00000508573 MX2P20592 715 aa7.51□□□□□ -1.21
SMARCA5-202ENST00000508573 ACDQ96AP0 544 aa7.51□□□□□ -1.21
SMARCA5-202ENST00000508573 RAB6BQ9NRW1 208 aa7.51□□□□□ -1.21
SMARCA5-202ENST00000508573 PHF20L1A8MW92 1017 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 SPATA31C2B4DYI2 1134 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 F11P03951 625 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 FOXK2Q01167 660 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 NUCKS1Q9H1E3 243 aaKnown RBP7.5□□□□□ -1.21
SMARCA5-202ENST00000508573 WASLO00401 505 aaPredicted RBP7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 TRAK2O60296 914 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 PHKA2P46019 1235 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 CENPCQ03188 943 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 BANK1Q8NDB2 785 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 CNKSR1Q969H4 720 aa7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 NSFL1CQ9UNZ2 370 aaKnown RBP7.49□□□□□ -1.21
SMARCA5-202ENST00000508573 GNRH1P01148 92 aa7.48□□□□□ -1.21
SMARCA5-202ENST00000508573 PODNQ7Z5L7 613 aa7.48□□□□□ -1.21
SMARCA5-202ENST00000508573 CDCA7Q9BWT1 371 aaPredicted RBP7.48□□□□□ -1.21
SMARCA5-202ENST00000508573 SNRKQ9NRH2 765 aa7.48□□□□□ -1.21
SMARCA5-202ENST00000508573 CEP126Q9P2H0 1117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms