RNA–Protein interactions for RNA: ENST00000503079.6

SMN1-203, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5 BASIC

Gene SMN1, Length 1,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-203ENST00000503079 QSER1Q2KHR3 1735 aa24.47■■□□□ 1.51
SMN1-203ENST00000503079 NCAPD2Q15021 1401 aa24.47■■□□□ 1.51
SMN1-203ENST00000503079 LRRC4BQ9NT99 713 aa24.47■■□□□ 1.51
SMN1-203ENST00000503079 ITGB4P16144 1822 aa24.47■■□□□ 1.51
SMN1-203ENST00000503079 INSRP06213 1382 aa24.46■■□□□ 1.51
SMN1-203ENST00000503079 HSPA5P11021 654 aaKnown RBP24.45■■□□□ 1.5
SMN1-203ENST00000503079 DDX54Q8TDD1 881 aaKnown RBP24.45■■□□□ 1.5
SMN1-203ENST00000503079 COL24A1Q17RW2 1714 aa24.44■■□□□ 1.5
SMN1-203ENST00000503079 FLT4P35916 1363 aa24.43■■□□□ 1.5
SMN1-203ENST00000503079 ZNF827Q17R98 1081 aa24.43■■□□□ 1.5
SMN1-203ENST00000503079 CDCA8Q53HL2 280 aa24.42■■□□□ 1.5
SMN1-203ENST00000503079 TAF1LQ8IZX4 1826 aa24.4■■□□□ 1.5
SMN1-203ENST00000503079 PTGER2P43116 358 aa24.4■■□□□ 1.5
SMN1-203ENST00000503079 KCNQ4P56696 695 aa24.4■■□□□ 1.5
SMN1-203ENST00000503079 SLC15A2Q16348 729 aa24.4■■□□□ 1.5
SMN1-203ENST00000503079 ZBTB7AO95365 584 aa24.39■■□□□ 1.49
SMN1-203ENST00000503079 KIF24Q5T7B8 1368 aa24.39■■□□□ 1.49
SMN1-203ENST00000503079 UTRNP46939 3433 aa24.39■■□□□ 1.49
SMN1-203ENST00000503079 ZCRB1Q8TBF4 217 aaKnown RBP24.38■■□□□ 1.49
SMN1-203ENST00000503079 PRIM1P49642 420 aaKnown RBP24.37■■□□□ 1.49
SMN1-203ENST00000503079 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
SMN1-203ENST00000503079 SGIP1Q9BQI5 828 aa24.37■■□□□ 1.49
SMN1-203ENST00000503079 SPON1Q9HCB6 807 aa24.37■■□□□ 1.49
SMN1-203ENST00000503079 C5P01031 1676 aa24.35■■□□□ 1.49
SMN1-203ENST00000503079 POLKQ9UBT6 870 aa24.35■■□□□ 1.49
SMN1-203ENST00000503079 SMG6Q86US8 1419 aaKnown RBP24.35■■□□□ 1.49
SMN1-203ENST00000503079 AKT1S1Q96B36 256 aa24.34■■□□□ 1.49
SMN1-203ENST00000503079 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
SMN1-203ENST00000503079 CYP27B1O15528 508 aa24.33■■□□□ 1.49
SMN1-203ENST00000503079 EIF4G2P78344 907 aaKnown RBP eCLIP24.33■■□□□ 1.49
SMN1-203ENST00000503079 STK32BQ9NY57 414 aa24.33■■□□□ 1.49
SMN1-203ENST00000503079 ATF5Q9Y2D1 282 aaPredicted RBP24.33■■□□□ 1.49
SMN1-203ENST00000503079 CGNL1Q0VF96 1302 aa24.31■■□□□ 1.48
SMN1-203ENST00000503079 WASHC2AQ641Q2 1341 aa24.31■■□□□ 1.48
SMN1-203ENST00000503079 SYTL4Q96C24 671 aaPredicted RBP24.29■■□□□ 1.48
SMN1-203ENST00000503079 EYA1Q99502 592 aa24.29■■□□□ 1.48
SMN1-203ENST00000503079 PANK3Q9H999 370 aa24.29■■□□□ 1.48
SMN1-203ENST00000503079 PNPLA7Q6ZV29 1317 aa24.28■■□□□ 1.48
SMN1-203ENST00000503079 PPM1GO15355 546 aaPredicted RBP24.27■■□□□ 1.48
SMN1-203ENST00000503079 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
SMN1-203ENST00000503079 TATP17735 454 aaPredicted RBP24.26■■□□□ 1.47
SMN1-203ENST00000503079 RAPGEF4Q8WZA2 1011 aa24.26■■□□□ 1.47
SMN1-203ENST00000503079 EIF4A2Q14240 407 aaKnown RBP24.25■■□□□ 1.47
SMN1-203ENST00000503079 UBR3Q6ZT12 1888 aa24.24■■□□□ 1.47
SMN1-203ENST00000503079 PCDH11XQ9BZA7 1347 aa24.24■■□□□ 1.47
SMN1-203ENST00000503079 PCDH11YQ9BZA8 1340 aa24.24■■□□□ 1.47
SMN1-203ENST00000503079 SLC27A3Q5K4L6 730 aa24.23■■□□□ 1.47
SMN1-203ENST00000503079 MTFR1LQ9H019 292 aa24.23■■□□□ 1.47
SMN1-203ENST00000503079 GOLGB1Q14789 3259 aaKnown RBP24.22■■□□□ 1.47
SMN1-203ENST00000503079 C4BP0C0L5 1744 aa24.22■■□□□ 1.47
SMN1-203ENST00000503079 PPP1R1BQ9UD71 204 aaPredicted RBP24.22■■□□□ 1.47
SMN1-203ENST00000503079 KIF7Q2M1P5 1343 aa24.21■■□□□ 1.47
SMN1-203ENST00000503079 AMIGO3Q86WK7 504 aa24.21■■□□□ 1.47
SMN1-203ENST00000503079 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
SMN1-203ENST00000503079 IGSF1Q8N6C5 1336 aa24.18■■□□□ 1.46
SMN1-203ENST00000503079 NKX1-1Q15270 411 aaPredicted RBP24.18■■□□□ 1.46
SMN1-203ENST00000503079 CCNL1Q9UK58 526 aaPredicted RBP24.18■■□□□ 1.46
SMN1-203ENST00000503079 VIRMAQ69YN4 1812 aaKnown RBP24.18■■□□□ 1.46
SMN1-203ENST00000503079 PALLDQ8WX93 1383 aa24.17■■□□□ 1.46
SMN1-203ENST00000503079 AMER1Q5JTC6 1135 aaPredicted RBP24.16■■□□□ 1.46
SMN1-203ENST00000503079 PIGBQ92521 554 aa24.16■■□□□ 1.46
SMN1-203ENST00000503079 MPRIPQ6WCQ1 1025 aa24.15■■□□□ 1.46
SMN1-203ENST00000503079 SMIM5Q71RC9 77 aa24.15■■□□□ 1.46
SMN1-203ENST00000503079 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
SMN1-203ENST00000503079 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.45
SMN1-203ENST00000503079 KDM6AO15550 1401 aaPredicted RBP24.13■■□□□ 1.45
SMN1-203ENST00000503079 PHKG2P15735 406 aa24.13■■□□□ 1.45
SMN1-203ENST00000503079 COL23A1Q86Y22 540 aaPredicted RBP24.13■■□□□ 1.45
SMN1-203ENST00000503079 COL5A3P25940 1745 aaPredicted RBP24.13■■□□□ 1.45
SMN1-203ENST00000503079 ARXQ96QS3 562 aa24.11■■□□□ 1.45
SMN1-203ENST00000503079 MAP3K5Q99683 1374 aa24.11■■□□□ 1.45
SMN1-203ENST00000503079 SCN11AQ9UI33 1791 aa24.11■■□□□ 1.45
SMN1-203ENST00000503079 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
SMN1-203ENST00000503079 TFCP2L1Q9NZI6 479 aa24.1■■□□□ 1.45
SMN1-203ENST00000503079 CHD4Q14839 1912 aa24.1■■□□□ 1.45
SMN1-203ENST00000503079 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.09■■□□□ 1.45
SMN1-203ENST00000503079 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
SMN1-203ENST00000503079 ASAP1Q9ULH1 1129 aa24.08■■□□□ 1.45
SMN1-203ENST00000503079 MYH14Q7Z406 1995 aaKnown RBP24.08■■□□□ 1.45
SMN1-203ENST00000503079 KDRP35968 1356 aa24.07■■□□□ 1.44
SMN1-203ENST00000503079 SPG7Q9UQ90 795 aa24.07■■□□□ 1.44
SMN1-203ENST00000503079 ITPK1Q13572 414 aa24.06■■□□□ 1.44
SMN1-203ENST00000503079 MORC1Q86VD1 984 aa24.06■■□□□ 1.44
SMN1-203ENST00000503079 SLC4A9Q96Q91 983 aa24.06■■□□□ 1.44
SMN1-203ENST00000503079 TJP1Q07157 1748 aa24.05■■□□□ 1.44
SMN1-203ENST00000503079 IL13P35225 146 aa24.05■■□□□ 1.44
SMN1-203ENST00000503079 LINC00116Q8NCU8 138 aa24.05■■□□□ 1.44
SMN1-203ENST00000503079 SLC16A10Q8TF71 515 aa24.05■■□□□ 1.44
SMN1-203ENST00000503079 COL3A1P02461 1466 aaPredicted RBP24.05■■□□□ 1.44
SMN1-203ENST00000503079 PLEKHG2Q9H7P9 1386 aa24.04■■□□□ 1.44
SMN1-203ENST00000503079 MSL1Q68DK7 614 aa24.04■■□□□ 1.44
SMN1-203ENST00000503079 NLGN2Q8NFZ4 835 aa24.04■■□□□ 1.44
SMN1-203ENST00000503079 ADAMTS7Q9UKP4 1686 aa24.03■■□□□ 1.44
SMN1-203ENST00000503079 IFNL2Q8IZJ0 200 aa24.03■■□□□ 1.44
SMN1-203ENST00000503079 ATG3Q9NT62 314 aa24.03■■□□□ 1.44
SMN1-203ENST00000503079 C4AP0C0L4 1744 aa24.03■■□□□ 1.44
SMN1-203ENST00000503079 YY1P25490 414 aa24.02■■□□□ 1.44
SMN1-203ENST00000503079 KNSTRNQ9Y448 316 aa24.01■■□□□ 1.43
SMN1-203ENST00000503079 CICQ96RK0 1608 aaPredicted RBP24.01■■□□□ 1.43
SMN1-203ENST00000503079 KIAA1551Q9HCM1 1747 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms