RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 KANK3Q6NY19 840 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 GLMNQ92990 594 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 USP35Q9P2H5 1018 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 CDK11AQ9UQ88 783 aaPredicted RBP9.35□□□□□ -0.91
RFC1-204ENST00000502706 MAP4K5Q9Y4K4 846 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 EMILIN1Q9Y6C2 1016 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 HMGXB3Q12766 1538 aa9.35□□□□□ -0.91
RFC1-204ENST00000502706 ARHGEF15O94989 841 aa9.34□□□□□ -0.91
RFC1-204ENST00000502706 RNFT1Q5M7Z0 435 aa9.34□□□□□ -0.91
RFC1-204ENST00000502706 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
RFC1-204ENST00000502706 RSBN1LQ6PCB5 846 aaPredicted RBP9.33□□□□□ -0.92
RFC1-204ENST00000502706 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
RFC1-204ENST00000502706 SMARCA4P51532 1647 aa9.33□□□□□ -0.92
RFC1-204ENST00000502706 ABL2P42684 1182 aa9.32□□□□□ -0.92
RFC1-204ENST00000502706 MARSP56192 900 aaKnown RBP9.32□□□□□ -0.92
RFC1-204ENST00000502706 DIXDC1Q155Q3 683 aa9.32□□□□□ -0.92
RFC1-204ENST00000502706 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
RFC1-204ENST00000502706 PUS7Q96PZ0 661 aaKnown RBP9.32□□□□□ -0.92
RFC1-204ENST00000502706 VASH1Q7L8A9 365 aaPredicted RBP9.31□□□□□ -0.92
RFC1-204ENST00000502706 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
RFC1-204ENST00000502706 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
RFC1-204ENST00000502706 CCDC116Q8IYX3 515 aa9.31□□□□□ -0.92
RFC1-204ENST00000502706 ARMC2Q8NEN0 867 aa9.31□□□□□ -0.92
RFC1-204ENST00000502706 SCARF2Q96GP6 870 aaPredicted RBP9.31□□□□□ -0.92
RFC1-204ENST00000502706 ZBTB3Q9H5J0 574 aa9.31□□□□□ -0.92
RFC1-204ENST00000502706 FIGNL2A6NMB9 653 aa9.3□□□□□ -0.92
RFC1-204ENST00000502706 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
RFC1-204ENST00000502706 PCDHB15Q9Y5E8 787 aa9.3□□□□□ -0.92
RFC1-204ENST00000502706 NESP48681 1621 aa9.3□□□□□ -0.92
RFC1-204ENST00000502706 SLC35F4A4IF30 521 aa9.29□□□□□ -0.92
RFC1-204ENST00000502706 POM121CA8CG34 1229 aa9.29□□□□□ -0.92
RFC1-204ENST00000502706 PRPF38BQ5VTL8 546 aaKnown RBP9.29□□□□□ -0.92
RFC1-204ENST00000502706 SND1Q7KZF4 910 aaKnown RBP eCLIP9.29□□□□□ -0.92
RFC1-204ENST00000502706 MTMR14Q8NCE2 650 aa9.29□□□□□ -0.92
RFC1-204ENST00000502706 IVNS1ABPQ9Y6Y0 642 aa9.29□□□□□ -0.92
RFC1-204ENST00000502706 SPINT1O43278 529 aa9.28□□□□□ -0.92
RFC1-204ENST00000502706 NBPF14Q5TI25 921 aa9.28□□□□□ -0.92
RFC1-204ENST00000502706 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
RFC1-204ENST00000502706 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
RFC1-204ENST00000502706 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
RFC1-204ENST00000502706 SOCS7O14512 581 aa9.27□□□□□ -0.93
RFC1-204ENST00000502706 RFX1P22670 979 aa9.27□□□□□ -0.93
RFC1-204ENST00000502706 ITGA6P23229 1130 aa9.27□□□□□ -0.93
RFC1-204ENST00000502706 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.93
RFC1-204ENST00000502706 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
RFC1-204ENST00000502706 THOC2Q8NI27 1593 aaKnown RBP9.26□□□□□ -0.93
RFC1-204ENST00000502706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
RFC1-204ENST00000502706 PER1O15534 1290 aaPredicted RBP9.26□□□□□ -0.93
RFC1-204ENST00000502706 Q6ZVU0 165 aa9.26□□□□□ -0.93
RFC1-204ENST00000502706 SH3BP5LQ7L8J4 393 aa9.26□□□□□ -0.93
RFC1-204ENST00000502706 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
RFC1-204ENST00000502706 CDC14CA4D256 554 aa9.25□□□□□ -0.93
RFC1-204ENST00000502706 XP32Q5T750 250 aa9.25□□□□□ -0.93
RFC1-204ENST00000502706 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
RFC1-204ENST00000502706 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
RFC1-204ENST00000502706 MAGEB6P1A0A0J9YX57 407 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 CBLBQ13191 982 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 TBC1D2BQ9UPU7 963 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 PEG3Q9GZU2 1588 aa9.23□□□□□ -0.93
RFC1-204ENST00000502706 ADAMTS2O95450 1211 aa9.22□□□□□ -0.93
RFC1-204ENST00000502706 MAP3K10Q02779 954 aa9.22□□□□□ -0.93
RFC1-204ENST00000502706 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
RFC1-204ENST00000502706 VRTNQ9H8Y1 702 aa9.21□□□□□ -0.94
RFC1-204ENST00000502706 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.94
RFC1-204ENST00000502706 ADAM23O75077 832 aa9.2□□□□□ -0.94
RFC1-204ENST00000502706 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
RFC1-204ENST00000502706 SRSF11Q05519 484 aaKnown RBP9.2□□□□□ -0.94
RFC1-204ENST00000502706 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
RFC1-204ENST00000502706 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
RFC1-204ENST00000502706 LYPD4Q6UWN0 246 aa9.2□□□□□ -0.94
RFC1-204ENST00000502706 TSC1Q92574 1164 aa9.2□□□□□ -0.94
RFC1-204ENST00000502706 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.94
RFC1-204ENST00000502706 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
RFC1-204ENST00000502706 MSTNO14793 375 aa9.19□□□□□ -0.94
RFC1-204ENST00000502706 CARD14Q9BXL6 1004 aa9.19□□□□□ -0.94
RFC1-204ENST00000502706 ENAMQ9NRM1 1142 aa9.19□□□□□ -0.94
RFC1-204ENST00000502706 CTSOP43234 321 aaPredicted RBP9.18□□□□□ -0.94
RFC1-204ENST00000502706 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
RFC1-204ENST00000502706 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
RFC1-204ENST00000502706 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
RFC1-204ENST00000502706 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
RFC1-204ENST00000502706 PDS5BQ9NTI5 1447 aa9.18□□□□□ -0.94
RFC1-204ENST00000502706 CARNS1A5YM72 827 aa9.17□□□□□ -0.94
RFC1-204ENST00000502706 CELA2BP08218 269 aaPredicted RBP9.17□□□□□ -0.94
RFC1-204ENST00000502706 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
RFC1-204ENST00000502706 CSPP1Q1MSJ5 1256 aa9.17□□□□□ -0.94
RFC1-204ENST00000502706 PLA2G4EQ3MJ16 856 aa9.17□□□□□ -0.94
RFC1-204ENST00000502706 MROH2BQ7Z745 1585 aa9.16□□□□□ -0.94
RFC1-204ENST00000502706 RBM47A0AV96 593 aaKnown RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 UNCXA6NJT0 531 aa9.16□□□□□ -0.94
RFC1-204ENST00000502706 NUTM2BA6NNL0 878 aaPredicted RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 PHF20L1A8MW92 1017 aa9.16□□□□□ -0.94
RFC1-204ENST00000502706 NUTM2EB1AL46 878 aaPredicted RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 AP1G2O75843 785 aa9.16□□□□□ -0.94
RFC1-204ENST00000502706 NUTM2DQ5VT03 806 aaPredicted RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 NUTM2AQ8IVF1 878 aaPredicted RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
RFC1-204ENST00000502706 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms