RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 VGLL3A8MV65 326 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 SLFN14P0C7P3 912 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 TIGD1Q96MW7 591 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 CTNNA3Q9UI47 895 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 DDX41Q9UJV9 622 aaKnown RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 CD109Q6YHK3 1445 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 NSD2O96028 1365 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 ZC3H13Q5T200 1668 aaKnown RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 GOLGA6L6A8MZA4 724 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 TULP1O00294 542 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 REC8O95072 547 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 KCNJ4P48050 445 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 NCBP1Q09161 790 aaKnown RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 CCDC183Q5T5S1 534 aa7.79□□□□□ -1.16
CCDC6-202ENST00000491922 RNF216Q9NWF9 866 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 MORC2Q9Y6X9 1032 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-202ENST00000491922 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 DIP2BQ9P265 1576 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 KDM4AO75164 1064 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
CCDC6-202ENST00000491922 CREBRFQ8IUR6 639 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 PLEKHM2Q8IWE5 1019 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 ARHGAP45Q92619 1136 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 TRIM35Q9UPQ4 493 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 SMTNL1A8MU46 457 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 MPNDQ8N594 471 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 TSPYL1Q9H0U9 437 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 CALCOCO1Q9P1Z2 691 aa7.78□□□□□ -1.16
CCDC6-202ENST00000491922 ZBTB22O15209 634 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 CUL4AQ13619 759 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 TERF2Q15554 542 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 INTS4Q96HW7 963 aaKnown RBP7.77□□□□□ -1.17
CCDC6-202ENST00000491922 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 ZFP91Q96JP5 570 aaPredicted RBP7.77□□□□□ -1.17
CCDC6-202ENST00000491922 FAM69CQ0P6D2 419 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 FOXD4L5Q5VV16 416 aaPredicted RBP7.77□□□□□ -1.17
CCDC6-202ENST00000491922 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 FOXD4L4Q8WXT5 416 aaPredicted RBP7.77□□□□□ -1.17
CCDC6-202ENST00000491922 PLEKHF1Q96S99 279 aa7.77□□□□□ -1.17
CCDC6-202ENST00000491922 ARHGAP5Q13017 1502 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 MX1P20591 662 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 TEX2Q8IWB9 1127 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 SIRT2Q8IXJ6 389 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 KRT222Q8N1A0 295 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 TMX3Q96JJ7 454 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 KCNF1Q9H3M0 494 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 PYCARDQ9ULZ3 195 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 ATAD2Q6PL18 1390 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 IFT172Q9UG01 1749 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 HCLS1P14317 486 aaPredicted RBP7.76□□□□□ -1.17
CCDC6-202ENST00000491922 C1orf115Q9H7X2 142 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 QRICH2Q9H0J4 1663 aa7.76□□□□□ -1.17
CCDC6-202ENST00000491922 SETBP1Q9Y6X0 1596 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 TET3O43151 1660 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 TULP2O00295 520 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 GADD45BO75293 160 aaPredicted RBP7.75□□□□□ -1.17
CCDC6-202ENST00000491922 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 KIF18AQ8NI77 898 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 PAXBP1Q9Y5B6 917 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 KIF24Q5T7B8 1368 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 ABCC4O15439 1325 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 WDR33Q9C0J8 1336 aaKnown RBP7.75□□□□□ -1.17
CCDC6-202ENST00000491922 ERC2O15083 957 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 DCTPP1Q9H773 170 aa7.75□□□□□ -1.17
CCDC6-202ENST00000491922 CHRM1P11229 460 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-202ENST00000491922 NEK4P51957 841 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 HAP1P54257 671 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-202ENST00000491922 CFAP70Q5T0N1 1121 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 COL3A1P02461 1466 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-202ENST00000491922 SDSP20132 328 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 PLCD3Q8N3E9 789 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 MRPL50Q8N5N7 158 aaKnown RBP7.74□□□□□ -1.17
CCDC6-202ENST00000491922 ZNF397Q8NF99 534 aaPredicted RBP7.74□□□□□ -1.17
CCDC6-202ENST00000491922 KIF1BO60333 1816 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 KNDC1Q76NI1 1749 aa7.74□□□□□ -1.17
CCDC6-202ENST00000491922 UBE2HP62256 183 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 CCDC112Q8NEF3 446 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 DEPDC5O75140 1603 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 MCCP23508 829 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 ILDR2Q71H61 639 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 FUCA2Q9BTY2 467 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 FAM53CQ9NYF3 392 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 TCHHQ07283 1943 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 NRXN1Q9ULB1 1477 aa7.73□□□□□ -1.17
CCDC6-202ENST00000491922 RTL1A6NKG5 1358 aa7.72□□□□□ -1.17
CCDC6-202ENST00000491922 RPAP1Q9BWH6 1393 aaPredicted RBP7.72□□□□□ -1.17
CCDC6-202ENST00000491922 U2SURPO15042 1029 aaKnown RBP7.72□□□□□ -1.17
CCDC6-202ENST00000491922 ANAPC15P60006 121 aa7.72□□□□□ -1.17
CCDC6-202ENST00000491922 PLCB2Q00722 1185 aa7.72□□□□□ -1.17
CCDC6-202ENST00000491922 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
CCDC6-202ENST00000491922 RGS12O14924 1447 aa7.72□□□□□ -1.17
CCDC6-202ENST00000491922 SMARCA5O60264 1052 aaPredicted RBP7.72□□□□□ -1.17
CCDC6-202ENST00000491922 PUS7Q96PZ0 661 aaKnown RBP7.72□□□□□ -1.17
CCDC6-202ENST00000491922 GDPD2Q9HCC8 539 aa7.72□□□□□ -1.17
CCDC6-202ENST00000491922 TNNT1P13805 278 aa7.71□□□□□ -1.17
CCDC6-202ENST00000491922 IRX3P78415 501 aaPredicted RBP7.71□□□□□ -1.17
CCDC6-202ENST00000491922 SPC24Q8NBT2 197 aa7.71□□□□□ -1.17
CCDC6-202ENST00000491922 BCCIPQ9P287 314 aaKnown RBP eCLIP7.71□□□□□ -1.17
CCDC6-202ENST00000491922 ANKRD26Q9UPS8 1709 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms