RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PRICKLE2Q7Z3G6 844 aa7.62□□□□□ -1.19
CCDC93-209ENST00000488908 GMCL1Q96IK5 515 aa7.62□□□□□ -1.19
CCDC93-209ENST00000488908 CUEDC1Q9NWM3 386 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-209ENST00000488908 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
CCDC93-209ENST00000488908 RNF144AP50876 292 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-209ENST00000488908 FOXR1Q6PIV2 292 aa7.61□□□□□ -1.19
CCDC93-209ENST00000488908 HMX1Q9NP08 348 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-209ENST00000488908 TRIM22Q8IYM9 498 aa7.6□□□□□ -1.19
CCDC93-209ENST00000488908 KDM4CQ9H3R0 1056 aa7.6□□□□□ -1.19
CCDC93-209ENST00000488908 CYLDQ9NQC7 956 aa7.6□□□□□ -1.19
CCDC93-209ENST00000488908 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
CCDC93-209ENST00000488908 ATP5J2-PTCD1G3V325 749 aa7.59□□□□□ -1.19
CCDC93-209ENST00000488908 RHOQP17081 205 aa7.59□□□□□ -1.19
CCDC93-209ENST00000488908 ZNF837Q96EG3 531 aaPredicted RBP7.59□□□□□ -1.19
CCDC93-209ENST00000488908 FAM117AQ9C073 453 aa7.59□□□□□ -1.19
CCDC93-209ENST00000488908 PHF20L1A8MW92 1017 aa7.58□□□□□ -1.2
CCDC93-209ENST00000488908 GPC1P35052 558 aa7.58□□□□□ -1.2
CCDC93-209ENST00000488908 GPBP1L1Q9HC44 474 aaPredicted RBP7.58□□□□□ -1.2
CCDC93-209ENST00000488908 H7C1W4 665 aa7.57□□□□□ -1.2
CCDC93-209ENST00000488908 RIPOR1Q6ZS17 1223 aa7.57□□□□□ -1.2
CCDC93-209ENST00000488908 IGF1RP08069 1367 aa7.57□□□□□ -1.2
CCDC93-209ENST00000488908 GPR25O00155 361 aa7.56□□□□□ -1.2
CCDC93-209ENST00000488908 MEN1O00255 615 aa7.56□□□□□ -1.2
CCDC93-209ENST00000488908 PODNQ7Z5L7 613 aa7.56□□□□□ -1.2
CCDC93-209ENST00000488908 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
CCDC93-209ENST00000488908 DYRK1BQ9Y463 629 aa7.56□□□□□ -1.2
CCDC93-209ENST00000488908 BCRP11274 1271 aa7.55□□□□□ -1.2
CCDC93-209ENST00000488908 RFC5P40937 340 aa7.55□□□□□ -1.2
CCDC93-209ENST00000488908 BEND7Q8N7W2 519 aaPredicted RBP7.55□□□□□ -1.2
CCDC93-209ENST00000488908 NEDD1Q8NHV4 660 aa7.55□□□□□ -1.2
CCDC93-209ENST00000488908 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
CCDC93-209ENST00000488908 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 ZBBXA8MT70 800 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 MSTNO14793 375 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 DBN1Q16643 649 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 SLC27A3Q5K4L6 730 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 PCDHB9Q9Y5E1 797 aa7.54□□□□□ -1.2
CCDC93-209ENST00000488908 CNTNAP5Q8WYK1 1306 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
CCDC93-209ENST00000488908 PLA2G4EQ3MJ16 856 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 RNF20Q5VTR2 975 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 GTPBP3Q969Y2 492 aaKnown RBP7.53□□□□□ -1.2
CCDC93-209ENST00000488908 DCAF5Q96JK2 942 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 NLRP3Q96P20 1036 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 GAS2L1Q99501 681 aaPredicted RBP7.53□□□□□ -1.2
CCDC93-209ENST00000488908 TRIM34Q9BYJ4 488 aa7.53□□□□□ -1.2
CCDC93-209ENST00000488908 NSFL1CQ9UNZ2 370 aaKnown RBP7.53□□□□□ -1.2
CCDC93-209ENST00000488908 ERVK-9P63128 1117 aa7.52□□□□□ -1.21
CCDC93-209ENST00000488908 POU4F2Q12837 409 aa7.52□□□□□ -1.21
CCDC93-209ENST00000488908 CC2D2BQ6DHV5 1058 aa7.52□□□□□ -1.21
CCDC93-209ENST00000488908 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
CCDC93-209ENST00000488908 MX2P20592 715 aa7.51□□□□□ -1.21
CCDC93-209ENST00000488908 TMEM259Q4ZIN3 620 aa7.51□□□□□ -1.21
CCDC93-209ENST00000488908 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
CCDC93-209ENST00000488908 ACDQ96AP0 544 aa7.51□□□□□ -1.21
CCDC93-209ENST00000488908 FBXO45P0C2W1 286 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 CLN3Q13286 438 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 WDR44Q5JSH3 913 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 NBPF10Q6P3W6 841 aaKnown RBP7.5□□□□□ -1.21
CCDC93-209ENST00000488908 NBPF15Q8N660 670 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 SPOCK3Q9BQ16 436 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 GRIP2Q9C0E4 1043 aa7.5□□□□□ -1.21
CCDC93-209ENST00000488908 SPATA31C2B4DYI2 1134 aa7.49□□□□□ -1.21
CCDC93-209ENST00000488908 MCCD1P59942 119 aaPredicted RBP7.49□□□□□ -1.21
CCDC93-209ENST00000488908 ZNF592Q92610 1267 aa7.49□□□□□ -1.21
CCDC93-209ENST00000488908 ESF1Q9H501 851 aaKnown RBP7.49□□□□□ -1.21
CCDC93-209ENST00000488908 TIMMDC1Q9NPL8 285 aa7.49□□□□□ -1.21
CCDC93-209ENST00000488908 ADAM23O75077 832 aa7.48□□□□□ -1.21
CCDC93-209ENST00000488908 TAS1R3Q7RTX0 852 aa7.48□□□□□ -1.21
CCDC93-209ENST00000488908 GALNT6Q8NCL4 622 aa7.48□□□□□ -1.21
CCDC93-209ENST00000488908 NUCKS1Q9H1E3 243 aaKnown RBP7.48□□□□□ -1.21
CCDC93-209ENST00000488908 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
CCDC93-209ENST00000488908 WASLO00401 505 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-209ENST00000488908 OIP5O43482 229 aa7.47□□□□□ -1.21
CCDC93-209ENST00000488908 F11P03951 625 aa7.47□□□□□ -1.21
CCDC93-209ENST00000488908 PCMTD1Q96MG8 357 aaPredicted RBP7.47□□□□□ -1.21
CCDC93-209ENST00000488908 MAP2K3P46734 347 aa7.46□□□□□ -1.22
CCDC93-209ENST00000488908 OXCT2Q9BYC2 517 aaPredicted RBP7.46□□□□□ -1.22
CCDC93-209ENST00000488908 ARHGEF10LQ9HCE6 1279 aa7.46□□□□□ -1.22
CCDC93-209ENST00000488908 ZNF330Q9Y3S2 320 aaPredicted RBP7.46□□□□□ -1.22
CCDC93-209ENST00000488908 PROCP04070 461 aa7.45□□□□□ -1.22
CCDC93-209ENST00000488908 ITGB2P05107 769 aa7.45□□□□□ -1.22
CCDC93-209ENST00000488908 SCTRP47872 440 aa7.45□□□□□ -1.22
CCDC93-209ENST00000488908 GJD4Q96KN9 370 aaPredicted RBP7.45□□□□□ -1.22
CCDC93-209ENST00000488908 PCDHB11Q9Y5F2 797 aa7.45□□□□□ -1.22
CCDC93-209ENST00000488908 TRAK2O60296 914 aa7.44□□□□□ -1.22
CCDC93-209ENST00000488908 NR1H3Q13133 447 aa7.44□□□□□ -1.22
CCDC93-209ENST00000488908 CFHR5Q9BXR6 569 aa7.44□□□□□ -1.22
CCDC93-209ENST00000488908 OSBPL3Q9H4L5 887 aa7.44□□□□□ -1.22
CCDC93-209ENST00000488908 PHF24Q9UPV7 400 aa7.44□□□□□ -1.22
CCDC93-209ENST00000488908 GNRH1P01148 92 aa7.43□□□□□ -1.22
CCDC93-209ENST00000488908 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
CCDC93-209ENST00000488908 A0A1B0GTH6 734 aa7.42□□□□□ -1.22
CCDC93-209ENST00000488908 ALYREFQ86V81 257 aaKnown RBP7.42□□□□□ -1.22
CCDC93-209ENST00000488908 CNKSR1Q969H4 720 aa7.42□□□□□ -1.22
CCDC93-209ENST00000488908 ESYT1Q9BSJ8 1104 aa7.42□□□□□ -1.22
CCDC93-209ENST00000488908 GPAMQ9HCL2 828 aa7.42□□□□□ -1.22
CCDC93-209ENST00000488908 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
CCDC93-209ENST00000488908 SNRPNP63162 240 aaKnown RBP7.41□□□□□ -1.22
CCDC93-209ENST00000488908 XP32Q5T750 250 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms