RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 ST20-MTHFSA0A0A6YYL1 179 aa7.9□□□□□ -1.14
COPS3-208ENST00000486032 NUTM2FA1L443 756 aa7.9□□□□□ -1.14
COPS3-208ENST00000486032 HSPA5P11021 654 aaKnown RBP7.9□□□□□ -1.14
COPS3-208ENST00000486032 PPP4CP60510 307 aa7.9□□□□□ -1.14
COPS3-208ENST00000486032 EIF4G2P78344 907 aaKnown RBP eCLIP7.9□□□□□ -1.14
COPS3-208ENST00000486032 POLR3GLQ9BT43 218 aa7.9□□□□□ -1.14
COPS3-208ENST00000486032 IL21Q9HBE4 155 aa7.9□□□□□ -1.14
COPS3-208ENST00000486032 RGPD8O14715 1765 aaPredicted RBP7.89□□□□□ -1.15
COPS3-208ENST00000486032 PHLPP1O60346 1717 aa7.89□□□□□ -1.15
COPS3-208ENST00000486032 FMN2Q9NZ56 1722 aa7.89□□□□□ -1.15
COPS3-208ENST00000486032 NHSL1Q5SYE7 1610 aa7.89□□□□□ -1.15
COPS3-208ENST00000486032 EIF3AQ14152 1382 aaKnown RBP7.89□□□□□ -1.15
COPS3-208ENST00000486032 GPRASP1Q5JY77 1395 aa7.89□□□□□ -1.15
COPS3-208ENST00000486032 TOM1O60784 492 aa7.89□□□□□ -1.15
COPS3-208ENST00000486032 MED1Q15648 1581 aaPredicted RBP7.88□□□□□ -1.15
COPS3-208ENST00000486032 CDC42BPGQ6DT37 1551 aa7.88□□□□□ -1.15
COPS3-208ENST00000486032 FAM135BQ49AJ0 1406 aa7.88□□□□□ -1.15
COPS3-208ENST00000486032 BRINP3Q76B58 766 aa7.88□□□□□ -1.15
COPS3-208ENST00000486032 MTRQ99707 1265 aa7.88□□□□□ -1.15
COPS3-208ENST00000486032 C1orf167Q5SNV9 1468 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 INSM1Q01101 510 aaPredicted RBP7.87□□□□□ -1.15
COPS3-208ENST00000486032 ORAI2Q96SN7 254 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 SLAIN2Q9P270 581 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 PCDHGA10Q9Y5H3 936 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 LRP6O75581 1613 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 AHDC1Q5TGY3 1603 aaPredicted RBP7.87□□□□□ -1.15
COPS3-208ENST00000486032 DLC1Q96QB1 1528 aa7.87□□□□□ -1.15
COPS3-208ENST00000486032 NCOA3Q9Y6Q9 1424 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 QRICH2Q9H0J4 1663 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 ATF3P18847 181 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 GGCXP38435 758 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 SRPK2P78362 688 aaKnown RBP7.86□□□□□ -1.15
COPS3-208ENST00000486032 PPP1R15BQ5SWA1 713 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 C19orf44Q9H6X5 657 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 DCCP43146 1447 aa7.86□□□□□ -1.15
COPS3-208ENST00000486032 ADGRB2O60241 1585 aa7.85□□□□□ -1.15
COPS3-208ENST00000486032 PRR36Q9H6K5 1346 aa7.85□□□□□ -1.15
COPS3-208ENST00000486032 WFS1O76024 890 aa7.85□□□□□ -1.15
COPS3-208ENST00000486032 TRIM67Q6ZTA4 783 aa7.85□□□□□ -1.15
COPS3-208ENST00000486032 CDK19Q9BWU1 502 aa7.85□□□□□ -1.15
COPS3-208ENST00000486032 EVC2Q86UK5 1308 aa7.84□□□□□ -1.15
COPS3-208ENST00000486032 TULP4Q9NRJ4 1543 aa7.84□□□□□ -1.15
COPS3-208ENST00000486032 TRIM6-TRIM34B2RNG4 842 aa7.84□□□□□ -1.15
COPS3-208ENST00000486032 WASLO00401 505 aaPredicted RBP7.84□□□□□ -1.15
COPS3-208ENST00000486032 TMF1P82094 1093 aa7.84□□□□□ -1.15
COPS3-208ENST00000486032 XPCQ01831 940 aaPredicted RBP7.84□□□□□ -1.15
COPS3-208ENST00000486032 ILDR2Q71H61 639 aa7.84□□□□□ -1.15
COPS3-208ENST00000486032 PXDNQ92626 1479 aa7.83□□□□□ -1.16
COPS3-208ENST00000486032 TYW1BQ6NUM6 668 aa7.83□□□□□ -1.16
COPS3-208ENST00000486032 CADPS2Q86UW7 1296 aa7.83□□□□□ -1.16
COPS3-208ENST00000486032 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
COPS3-208ENST00000486032 TESK2Q96S53 571 aa7.83□□□□□ -1.16
COPS3-208ENST00000486032 ESCO1Q5FWF5 840 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 PMFBP1Q8TBY8 1022 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 ZNF516Q92618 1163 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 RGS17Q9UGC6 210 aaPredicted RBP7.82□□□□□ -1.16
COPS3-208ENST00000486032 SHPRHQ149N8 1683 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 TOPAZ1Q8N9V7 1692 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 DISP3Q9P2K9 1392 aa7.82□□□□□ -1.16
COPS3-208ENST00000486032 ATP7BP35670 1465 aa7.81□□□□□ -1.16
COPS3-208ENST00000486032 C11orf95C9JLR9 678 aaPredicted RBP7.81□□□□□ -1.16
COPS3-208ENST00000486032 WIPF1O43516 503 aa7.81□□□□□ -1.16
COPS3-208ENST00000486032 MAP3K9P80192 1104 aa7.81□□□□□ -1.16
COPS3-208ENST00000486032 NUDT16Q96DE0 195 aaKnown RBP7.81□□□□□ -1.16
COPS3-208ENST00000486032 TMUB1Q9BVT8 246 aa7.81□□□□□ -1.16
COPS3-208ENST00000486032 TRPM3Q9HCF6 1732 aaPredicted RBP7.81□□□□□ -1.16
COPS3-208ENST00000486032 CRISPLD2Q9H0B8 497 aa7.8□□□□□ -1.16
COPS3-208ENST00000486032 PNPLA6Q8IY17 1366 aa7.8□□□□□ -1.16
COPS3-208ENST00000486032 ABCA3Q99758 1704 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 SLC24A1O60721 1099 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 PRR20EP86478 221 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 PRR20CP86479 221 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 PRR20DP86480 221 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 PRR20BP86481 221 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 PRR20AP86496 221 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 CNGB1Q14028 1251 aaPredicted RBP7.79□□□□□ -1.16
COPS3-208ENST00000486032 CDCA8Q53HL2 280 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 SLC12A5Q9H2X9 1139 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 SBNO2Q9Y2G9 1366 aa7.79□□□□□ -1.16
COPS3-208ENST00000486032 KIF7Q2M1P5 1343 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 FAM187AA6NFU0 413 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 FOXO3O43524 673 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 ECM2O94769 699 aaPredicted RBP7.78□□□□□ -1.16
COPS3-208ENST00000486032 PHF14O94880 888 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 NGDNQ8NEJ9 315 aaKnown RBP7.78□□□□□ -1.16
COPS3-208ENST00000486032 NKX2-3Q8TAU0 364 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 ATAD2Q6PL18 1390 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 KIF1AQ12756 1690 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 CRYBG1Q9Y4K1 1723 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
COPS3-208ENST00000486032 PPIP5K1Q6PFW1 1433 aa7.78□□□□□ -1.16
COPS3-208ENST00000486032 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
COPS3-208ENST00000486032 JCADQ9P266 1359 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 NUTM2BA6NNL0 878 aaPredicted RBP7.77□□□□□ -1.17
COPS3-208ENST00000486032 NUTM2EB1AL46 878 aaPredicted RBP7.77□□□□□ -1.17
COPS3-208ENST00000486032 SLC19A1P41440 591 aa7.77□□□□□ -1.17
COPS3-208ENST00000486032 PSME1Q06323 249 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 309.3 ms