RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ARHGEF15O94989 841 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 GDF11O95390 407 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 ADAMTS2O95450 1211 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 NEUROD2Q15784 382 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 TMEM151AQ8N4L1 468 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 BCANQ96GW7 911 aa8.67□□□□□ -1.02
CMSS1-204ENST00000479555 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
CMSS1-204ENST00000479555 ATP5J2-PTCD1G3V325 749 aa8.65□□□□□ -1.02
CMSS1-204ENST00000479555 IRS1P35568 1242 aa8.65□□□□□ -1.02
CMSS1-204ENST00000479555 SCTRP47872 440 aa8.65□□□□□ -1.02
CMSS1-204ENST00000479555 RNF144AP50876 292 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-204ENST00000479555 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
CMSS1-204ENST00000479555 SEPT12Q8IYM1 358 aa8.64□□□□□ -1.03
CMSS1-204ENST00000479555 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
CMSS1-204ENST00000479555 A0A1W2PRU2 124 aa8.63□□□□□ -1.03
CMSS1-204ENST00000479555 GPR37L1O60883 481 aa8.63□□□□□ -1.03
CMSS1-204ENST00000479555 RIPOR1Q6ZS17 1223 aa8.63□□□□□ -1.03
CMSS1-204ENST00000479555 POU4F2Q12837 409 aa8.62□□□□□ -1.03
CMSS1-204ENST00000479555 DBN1Q16643 649 aa8.62□□□□□ -1.03
CMSS1-204ENST00000479555 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
CMSS1-204ENST00000479555 GOPCQ9HD26 462 aa8.61□□□□□ -1.03
CMSS1-204ENST00000479555 RAB6BQ9NRW1 208 aa8.61□□□□□ -1.03
CMSS1-204ENST00000479555 PCDHB11Q9Y5F2 797 aa8.61□□□□□ -1.03
CMSS1-204ENST00000479555 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
CMSS1-204ENST00000479555 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
CMSS1-204ENST00000479555 CC2D2BQ6DHV5 1058 aa8.6□□□□□ -1.03
CMSS1-204ENST00000479555 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
CMSS1-204ENST00000479555 ARHGEF10LQ9HCE6 1279 aa8.6□□□□□ -1.03
CMSS1-204ENST00000479555 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
CMSS1-204ENST00000479555 SRSF11Q05519 484 aaKnown RBP8.59□□□□□ -1.03
CMSS1-204ENST00000479555 MTMR14Q8NCE2 650 aa8.59□□□□□ -1.03
CMSS1-204ENST00000479555 GTPBP3Q969Y2 492 aaKnown RBP8.59□□□□□ -1.03
CMSS1-204ENST00000479555 NR1H3Q13133 447 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
CMSS1-204ENST00000479555 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
CMSS1-204ENST00000479555 IGF1RP08069 1367 aa8.57□□□□□ -1.04
CMSS1-204ENST00000479555 BRPF1P55201 1214 aaPredicted RBP8.56□□□□□ -1.04
CMSS1-204ENST00000479555 MAP3K10Q02779 954 aa8.56□□□□□ -1.04
CMSS1-204ENST00000479555 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
CMSS1-204ENST00000479555 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
CMSS1-204ENST00000479555 GRIP2Q9C0E4 1043 aa8.56□□□□□ -1.04
CMSS1-204ENST00000479555 GPC1P35052 558 aa8.55□□□□□ -1.04
CMSS1-204ENST00000479555 CLN3Q13286 438 aa8.55□□□□□ -1.04
CMSS1-204ENST00000479555 CDCA7Q9BWT1 371 aaPredicted RBP8.55□□□□□ -1.04
CMSS1-204ENST00000479555 MBIPQ9NS73 344 aa8.55□□□□□ -1.04
CMSS1-204ENST00000479555 DYRK1BQ9Y463 629 aa8.55□□□□□ -1.04
CMSS1-204ENST00000479555 TRAK2O60296 914 aa8.54□□□□□ -1.04
CMSS1-204ENST00000479555 STAU1O95793 577 aaKnown RBP8.54□□□□□ -1.04
CMSS1-204ENST00000479555 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
CMSS1-204ENST00000479555 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
CMSS1-204ENST00000479555 THBS1P07996 1170 aa8.53□□□□□ -1.04
CMSS1-204ENST00000479555 PHKA2P46019 1235 aa8.53□□□□□ -1.04
CMSS1-204ENST00000479555 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
CMSS1-204ENST00000479555 ACDQ96AP0 544 aa8.53□□□□□ -1.04
CMSS1-204ENST00000479555 CCDC85AQ96PX6 553 aaPredicted RBP8.53□□□□□ -1.04
CMSS1-204ENST00000479555 GPAMQ9HCL2 828 aa8.53□□□□□ -1.04
CMSS1-204ENST00000479555 IL2RAP01589 272 aa8.52□□□□□ -1.05
CMSS1-204ENST00000479555 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
CMSS1-204ENST00000479555 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
CMSS1-204ENST00000479555 DNMT3AQ9Y6K1 912 aaPredicted RBP8.52□□□□□ -1.05
CMSS1-204ENST00000479555 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.05
CMSS1-204ENST00000479555 WASLO00401 505 aaPredicted RBP8.51□□□□□ -1.05
CMSS1-204ENST00000479555 TSGA10IPQ3SY00 556 aa8.51□□□□□ -1.05
CMSS1-204ENST00000479555 SPATA31C2B4DYI2 1134 aa8.5□□□□□ -1.05
CMSS1-204ENST00000479555 FOXR1Q6PIV2 292 aa8.5□□□□□ -1.05
CMSS1-204ENST00000479555 TAS1R3Q7RTX0 852 aa8.5□□□□□ -1.05
CMSS1-204ENST00000479555 CNKSR1Q969H4 720 aa8.5□□□□□ -1.05
CMSS1-204ENST00000479555 NUCKS1Q9H1E3 243 aaKnown RBP8.5□□□□□ -1.05
CMSS1-204ENST00000479555 BCRP11274 1271 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 CENPCQ03188 943 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 KANK3Q6NY19 840 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 BANK1Q8NDB2 785 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
CMSS1-204ENST00000479555 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 TBC1D2BQ9UPU7 963 aa8.49□□□□□ -1.05
CMSS1-204ENST00000479555 H7C1W4 665 aa8.48□□□□□ -1.05
CMSS1-204ENST00000479555 MX2P20592 715 aa8.48□□□□□ -1.05
CMSS1-204ENST00000479555 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
CMSS1-204ENST00000479555 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
CMSS1-204ENST00000479555 F11P03951 625 aa8.47□□□□□ -1.05
CMSS1-204ENST00000479555 ESYT1Q9BSJ8 1104 aa8.47□□□□□ -1.05
CMSS1-204ENST00000479555 ZNF330Q9Y3S2 320 aaPredicted RBP8.47□□□□□ -1.05
CMSS1-204ENST00000479555 ITGB2P05107 769 aa8.46□□□□□ -1.06
CMSS1-204ENST00000479555 MCCD1P59942 119 aaPredicted RBP8.46□□□□□ -1.06
CMSS1-204ENST00000479555 CCDC125Q86Z20 511 aa8.46□□□□□ -1.06
CMSS1-204ENST00000479555 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
CMSS1-204ENST00000479555 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
CMSS1-204ENST00000479555 GNRH1P01148 92 aa8.45□□□□□ -1.06
CMSS1-204ENST00000479555 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
CMSS1-204ENST00000479555 ZSCAN10Q96SZ4 725 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-204ENST00000479555 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
CMSS1-204ENST00000479555 RUBCNLQ9H714 662 aa8.45□□□□□ -1.06
CMSS1-204ENST00000479555 HRH3Q9Y5N1 445 aa8.45□□□□□ -1.06
CMSS1-204ENST00000479555 SNRPNP63162 240 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms