RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 TOM1L2Q6ZVM7 507 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 TCP11L2Q8N4U5 519 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
PGK1-204ENST00000477335 MEX3CQ5U5Q3 659 aaKnown RBP12.31□□□□□ -0.44
PGK1-204ENST00000477335 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
PGK1-204ENST00000477335 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
PGK1-204ENST00000477335 AFF2P51816 1311 aa12.31□□□□□ -0.44
PGK1-204ENST00000477335 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
PGK1-204ENST00000477335 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
PGK1-204ENST00000477335 MTHFSDQ2M296 383 aaKnown RBP12.3□□□□□ -0.44
PGK1-204ENST00000477335 SPATA31A1Q5TZJ5 1347 aa12.3□□□□□ -0.44
PGK1-204ENST00000477335 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
PGK1-204ENST00000477335 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
PGK1-204ENST00000477335 OVOS2A0A0G2JMS6 1433 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 USP35Q9P2H5 1018 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 USP21Q9UK80 565 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 WNK3Q9BYP7 1800 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 ZNF521Q96K83 1311 aa12.29□□□□□ -0.44
PGK1-204ENST00000477335 ATRNO75882 1429 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 GLI3P10071 1580 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 VPS72Q15906 364 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
PGK1-204ENST00000477335 MAPK8IP3Q9UPT6 1336 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 SHANK3Q9BYB0 1731 aa12.28□□□□□ -0.44
PGK1-204ENST00000477335 ABCB7O75027 752 aa12.27□□□□□ -0.45
PGK1-204ENST00000477335 NEUROD2Q15784 382 aa12.27□□□□□ -0.45
PGK1-204ENST00000477335 ZBED9Q6R2W3 1325 aa12.27□□□□□ -0.45
PGK1-204ENST00000477335 PARP4Q9UKK3 1724 aaKnown RBP12.26□□□□□ -0.45
PGK1-204ENST00000477335 TATP17735 454 aaPredicted RBP12.26□□□□□ -0.45
PGK1-204ENST00000477335 RAPGEF4Q8WZA2 1011 aa12.26□□□□□ -0.45
PGK1-204ENST00000477335 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
PGK1-204ENST00000477335 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
PGK1-204ENST00000477335 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
PGK1-204ENST00000477335 DLG5Q8TDM6 1919 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 IL2RBP14784 551 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 DSG3P32926 999 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 RIPK4P57078 832 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 DCTN1Q14203 1278 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
PGK1-204ENST00000477335 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
PGK1-204ENST00000477335 CYP27B1O15528 508 aa12.24□□□□□ -0.45
PGK1-204ENST00000477335 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
PGK1-204ENST00000477335 PLEKHO1Q53GL0 409 aaPredicted RBP12.24□□□□□ -0.45
PGK1-204ENST00000477335 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
PGK1-204ENST00000477335 THSD7AQ9UPZ6 1657 aa12.24□□□□□ -0.45
PGK1-204ENST00000477335 CCDC9Q9Y3X0 531 aaKnown RBP12.24□□□□□ -0.45
PGK1-204ENST00000477335 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
PGK1-204ENST00000477335 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 PLEKHG2Q9H7P9 1386 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
PGK1-204ENST00000477335 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 GAS2L2Q8NHY3 880 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
PGK1-204ENST00000477335 PHKG2P15735 406 aa12.22□□□□□ -0.45
PGK1-204ENST00000477335 AMOTQ4VCS5 1084 aa12.22□□□□□ -0.45
PGK1-204ENST00000477335 MCM10Q7L590 875 aa12.22□□□□□ -0.45
PGK1-204ENST00000477335 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
PGK1-204ENST00000477335 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
PGK1-204ENST00000477335 GJD4Q96KN9 370 aaPredicted RBP12.22□□□□□ -0.45
PGK1-204ENST00000477335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.453e-29■□□□□ 9.8
PGK1-204ENST00000477335 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
PGK1-204ENST00000477335 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
PGK1-204ENST00000477335 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
PGK1-204ENST00000477335 NEFMP07197 916 aa12.21□□□□□ -0.45
PGK1-204ENST00000477335 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
PGK1-204ENST00000477335 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
PGK1-204ENST00000477335 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
PGK1-204ENST00000477335 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
PGK1-204ENST00000477335 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
PGK1-204ENST00000477335 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
PGK1-204ENST00000477335 CEMIPQ8WUJ3 1361 aa12.19□□□□□ -0.46
PGK1-204ENST00000477335 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
PGK1-204ENST00000477335 POTEAQ6S8J7 498 aa12.19□□□□□ -0.46
PGK1-204ENST00000477335 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
PGK1-204ENST00000477335 NGEFQ8N5V2 710 aa12.19□□□□□ -0.46
PGK1-204ENST00000477335 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
PGK1-204ENST00000477335 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
PGK1-204ENST00000477335 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
PGK1-204ENST00000477335 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
PGK1-204ENST00000477335 ONECUT3O60422 494 aaPredicted RBP12.18□□□□□ -0.46
PGK1-204ENST00000477335 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
PGK1-204ENST00000477335 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
PGK1-204ENST00000477335 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
PGK1-204ENST00000477335 MRC1P22897 1456 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 LMOD3Q0VAK6 560 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
PGK1-204ENST00000477335 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
PGK1-204ENST00000477335 WDR63Q8IWG1 891 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
PGK1-204ENST00000477335 MARCH10Q8NA82 808 aaPredicted RBP12.17□□□□□ -0.46
PGK1-204ENST00000477335 CDCA7Q9BWT1 371 aaPredicted RBP12.17□□□□□ -0.46
PGK1-204ENST00000477335 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms