RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 DKK1O94907 266 aa6.72□□□□□ -1.33
VPS13D-207ENST00000476169 GGCXP38435 758 aa6.72□□□□□ -1.33
VPS13D-207ENST00000476169 TRIM32Q13049 653 aa6.72□□□□□ -1.33
VPS13D-207ENST00000476169 KCTD15Q96SI1 283 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-207ENST00000476169 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
VPS13D-207ENST00000476169 SFI1A8K8P3 1242 aa6.71□□□□□ -1.34
VPS13D-207ENST00000476169 PRMT3O60678 531 aa6.71□□□□□ -1.34
VPS13D-207ENST00000476169 MYCP01106 439 aaPredicted RBP6.71□□□□□ -1.34
VPS13D-207ENST00000476169 VARSP26640 1264 aaKnown RBP6.71□□□□□ -1.34
VPS13D-207ENST00000476169 POTEGQ6S5H5 508 aa6.71□□□□□ -1.34
VPS13D-207ENST00000476169 ANKLE1Q8NAG6 615 aa6.71□□□□□ -1.34
VPS13D-207ENST00000476169 SHROOM4Q9ULL8 1493 aa6.71□□□□□ -1.34
VPS13D-207ENST00000476169 ITGBL1O95965 494 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-207ENST00000476169 WNT7BP56706 349 aa6.7□□□□□ -1.34
VPS13D-207ENST00000476169 PLA2G2CQ5R387 149 aa6.7□□□□□ -1.34
VPS13D-207ENST00000476169 VASH1Q7L8A9 365 aaPredicted RBP6.7□□□□□ -1.34
VPS13D-207ENST00000476169 PRIMPOLQ96LW4 560 aa6.7□□□□□ -1.34
VPS13D-207ENST00000476169 HCSTQ9UBK5 93 aa6.7□□□□□ -1.34
VPS13D-207ENST00000476169 MAP4K5Q9Y4K4 846 aa6.7□□□□□ -1.34
VPS13D-207ENST00000476169 SERPINB4P48594 390 aa6.69□□□□□ -1.34
VPS13D-207ENST00000476169 INTS6LQ5JSJ4 861 aaKnown RBP6.69□□□□□ -1.34
VPS13D-207ENST00000476169 C1orf216Q8TAB5 229 aa6.69□□□□□ -1.34
VPS13D-207ENST00000476169 HINFPQ9BQA5 517 aa6.69□□□□□ -1.34
VPS13D-207ENST00000476169 ESF1Q9H501 851 aaKnown RBP6.69□□□□□ -1.34
VPS13D-207ENST00000476169 CXXC1Q9P0U4 656 aaPredicted RBP6.69□□□□□ -1.34
VPS13D-207ENST00000476169 SOWAHDA6NJG2 315 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 ERVH48-1M5A8F1 160 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 SCNN1AP37088 669 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 SKOR1P84550 965 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 ARID5BQ14865 1188 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 OCLNQ16625 522 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 EHBP1Q8NDI1 1231 aa6.68□□□□□ -1.34
VPS13D-207ENST00000476169 LGR5O75473 907 aa6.67□□□□□ -1.34
VPS13D-207ENST00000476169 SCTRP47872 440 aa6.67□□□□□ -1.34
VPS13D-207ENST00000476169 RPIAP49247 311 aa6.67□□□□□ -1.34
VPS13D-207ENST00000476169 TSEN2Q8NCE0 465 aaKnown RBP6.66□□□□□ -1.34
VPS13D-207ENST00000476169 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.66□□□□□ -1.34
VPS13D-207ENST00000476169 M0R2N6 131 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 CD2BP2O95400 341 aaKnown RBP6.65□□□□□ -1.34
VPS13D-207ENST00000476169 ABL1P00519 1130 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 FSHRP23945 695 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 ERVK-9P63128 1117 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
VPS13D-207ENST00000476169 CC2D2BQ6DHV5 1058 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 PPP1R18Q6NYC8 613 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 TAS1R3Q7RTX0 852 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS13D-207ENST00000476169 RNF166Q96A37 237 aaPredicted RBP6.65□□□□□ -1.34
VPS13D-207ENST00000476169 TRIM52Q96A61 297 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
VPS13D-207ENST00000476169 AMOTL2Q9Y2J4 779 aa6.65□□□□□ -1.34
VPS13D-207ENST00000476169 DHX9Q08211 1270 aaKnown RBP6.64□□□□□ -1.35
VPS13D-207ENST00000476169 CDK15Q96Q40 435 aa6.64□□□□□ -1.35
VPS13D-207ENST00000476169 CYLDQ9NQC7 956 aa6.64□□□□□ -1.35
VPS13D-207ENST00000476169 ZNF358Q9NW07 568 aa6.64□□□□□ -1.35
VPS13D-207ENST00000476169 WEE1P30291 646 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 ZNF211Q13398 564 aaPredicted RBP6.63□□□□□ -1.35
VPS13D-207ENST00000476169 MKNK1Q9BUB5 465 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 USP35Q9P2H5 1018 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 EGFL7Q9UHF1 273 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 TLL2Q9Y6L7 1015 aa6.63□□□□□ -1.35
VPS13D-207ENST00000476169 TMEM229AB2RXF0 380 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 H3BRB1 525 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 GRM5P41594 1212 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 GDF10P55107 478 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 MARSP56192 900 aaKnown RBP6.62□□□□□ -1.35
VPS13D-207ENST00000476169 FKBP5Q13451 457 aaPredicted RBP6.62□□□□□ -1.35
VPS13D-207ENST00000476169 OSBPL3Q9H4L5 887 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 TUT1Q9H6E5 874 aaKnown RBP6.62□□□□□ -1.35
VPS13D-207ENST00000476169 ANO2Q9NQ90 1003 aa6.62□□□□□ -1.35
VPS13D-207ENST00000476169 BACH1O14867 736 aa6.61□□□□□ -1.35
VPS13D-207ENST00000476169 SCNN1DP51172 638 aa6.61□□□□□ -1.35
VPS13D-207ENST00000476169 GLYCTKQ8IVS8 523 aa6.61□□□□□ -1.35
VPS13D-207ENST00000476169 MPNDQ8N594 471 aa6.61□□□□□ -1.35
VPS13D-207ENST00000476169 ZNF784Q8NCA9 323 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-207ENST00000476169 GTF3C2Q8WUA4 911 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-207ENST00000476169 SEPT3Q9UH03 358 aa6.61□□□□□ -1.35
VPS13D-207ENST00000476169 ICMTO60725 284 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 PTCD1O75127 700 aaKnown RBP6.6□□□□□ -1.35
VPS13D-207ENST00000476169 STAU1O95793 577 aaKnown RBP6.6□□□□□ -1.35
VPS13D-207ENST00000476169 ADH1CP00326 375 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 ERCC3P19447 782 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 IGFBP4P22692 258 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 MYT1Q01538 1121 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 PPP1R26Q5T8A7 1209 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-207ENST00000476169 DNAJC14Q6Y2X3 702 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-207ENST00000476169 LIAT1Q6ZQX7 453 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 CYP2U1Q7Z449 544 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 CCDC116Q8IYX3 515 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 TNS4Q8IZW8 715 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 GAS2L2Q8NHY3 880 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 PURBQ96QR8 312 aaKnown RBP6.6□□□□□ -1.35
VPS13D-207ENST00000476169 SERTAD1Q9UHV2 236 aa6.6□□□□□ -1.35
VPS13D-207ENST00000476169 WASLO00401 505 aaPredicted RBP6.59□□□□□ -1.35
VPS13D-207ENST00000476169 SIAH2O43255 324 aa6.59□□□□□ -1.35
VPS13D-207ENST00000476169 C21orf2O43822 256 aa6.59□□□□□ -1.35
VPS13D-207ENST00000476169 INHAP05111 366 aa6.59□□□□□ -1.35
VPS13D-207ENST00000476169 NR5A1Q13285 461 aa6.59□□□□□ -1.35
VPS13D-207ENST00000476169 CAPN12Q6ZSI9 719 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms