RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
SPEN-204ENST00000471538 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 MYH16Q9H6N6 1097 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 SSH2Q76I76 1423 aa8.31□□□□□ -1.08
SPEN-204ENST00000471538 CHD2O14647 1828 aaKnown RBP8.31□□□□□ -1.08
SPEN-204ENST00000471538 PIK3R4Q99570 1358 aa8.3□□□□□ -1.08
SPEN-204ENST00000471538 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
SPEN-204ENST00000471538 FCHSD2O94868 740 aa8.3□□□□□ -1.08
SPEN-204ENST00000471538 CT47B1P0C2W7 299 aaPredicted RBP8.3□□□□□ -1.08
SPEN-204ENST00000471538 NME9Q86XW9 330 aa8.3□□□□□ -1.08
SPEN-204ENST00000471538 BACH2Q9BYV9 841 aa8.3□□□□□ -1.08
SPEN-204ENST00000471538 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.3□□□□□ -1.08
SPEN-204ENST00000471538 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
SPEN-204ENST00000471538 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 FBLN1P23142 703 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 PDE4AP27815 886 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 IL13P35225 146 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 SKAP1Q86WV1 359 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 PNNQ9H307 717 aaKnown RBP8.29□□□□□ -1.08
SPEN-204ENST00000471538 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 USP6P35125 1406 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 DCAF8Q5TAQ9 597 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 EMILIN1Q9Y6C2 1016 aa8.29□□□□□ -1.08
SPEN-204ENST00000471538 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
SPEN-204ENST00000471538 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 MSH6P52701 1360 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 USP31Q70CQ4 1352 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 RLBP1P12271 317 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 MYT1Q01538 1121 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 AAMPQ13685 434 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 PANK1Q8TE04 598 aa8.28□□□□□ -1.08
SPEN-204ENST00000471538 TTC21BQ7Z4L5 1316 aa8.27□□□□□ -1.08
SPEN-204ENST00000471538 EP400Q96L91 3159 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 IGHDP01880 384 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 PYGBP11216 843 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 RIPK4P57078 832 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 ZNF772Q68DY9 489 aaPredicted RBP8.27□□□□□ -1.09
SPEN-204ENST00000471538 TSR2Q969E8 191 aaKnown RBP8.27□□□□□ -1.09
SPEN-204ENST00000471538 CLUAP1Q96AJ1 413 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 COG3Q96JB2 828 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 TNNQ9UQP3 1299 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 COG6Q9Y2V7 657 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 DLG5Q8TDM6 1919 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 ACEP12821 1306 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 SPATA31A6Q5VVP1 1343 aa8.27□□□□□ -1.09
SPEN-204ENST00000471538 VIRMAQ69YN4 1812 aaKnown RBP8.26□□□□□ -1.09
SPEN-204ENST00000471538 RGS12O14924 1447 aa8.26□□□□□ -1.09
SPEN-204ENST00000471538 FMN2Q9NZ56 1722 aa8.26□□□□□ -1.09
SPEN-204ENST00000471538 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
SPEN-204ENST00000471538 RGPD8O14715 1765 aaPredicted RBP8.26□□□□□ -1.09
SPEN-204ENST00000471538 RXRBP28702 533 aa8.26□□□□□ -1.09
SPEN-204ENST00000471538 EXOSC9Q06265 439 aaKnown RBP8.26□□□□□ -1.09
SPEN-204ENST00000471538 NFE2L2Q16236 605 aa8.26□□□□□ -1.09
SPEN-204ENST00000471538 AMOTL2Q9Y2J4 779 aa8.26□□□□□ -1.09
SPEN-204ENST00000471538 PIK3C2AO00443 1686 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 ANKARQ7Z5J8 1434 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 MEX3CQ5U5Q3 659 aaKnown RBP8.25□□□□□ -1.09
SPEN-204ENST00000471538 PDCD7Q8N8D1 485 aaKnown RBP8.25□□□□□ -1.09
SPEN-204ENST00000471538 PHACTR3Q96KR7 559 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 IPO9Q96P70 1041 aaKnown RBP8.25□□□□□ -1.09
SPEN-204ENST00000471538 HS3ST6Q96QI5 342 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 BCL2L13Q9BXK5 485 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 NCOA3Q9Y6Q9 1424 aa8.25□□□□□ -1.09
SPEN-204ENST00000471538 PPM1GO15355 546 aaPredicted RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 ZNF853P0CG23 659 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 CANXP27824 592 aaKnown RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 ANP32AP39687 249 aaKnown RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 MVPQ14764 893 aaKnown RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 RRS1Q15050 365 aaKnown RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 ZKSCAN2Q63HK3 967 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 FRAT1Q92837 279 aaPredicted RBP8.24□□□□□ -1.09
SPEN-204ENST00000471538 PCDHB8Q9UN66 801 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 AFF2P51816 1311 aa8.24□□□□□ -1.09
SPEN-204ENST00000471538 HMOX1P09601 288 aa8.23□□□□□ -1.09
SPEN-204ENST00000471538 EMP3P54852 163 aa8.23□□□□□ -1.09
SPEN-204ENST00000471538 ALDH1L2Q3SY69 923 aa8.23□□□□□ -1.09
SPEN-204ENST00000471538 NOP58Q9Y2X3 529 aaKnown RBP8.23□□□□□ -1.09
SPEN-204ENST00000471538 PCDHB15Q9Y5E8 787 aa8.23□□□□□ -1.09
SPEN-204ENST00000471538 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
SPEN-204ENST00000471538 NUTM2BA6NNL0 878 aaPredicted RBP8.22□□□□□ -1.09
SPEN-204ENST00000471538 NUTM2EB1AL46 878 aaPredicted RBP8.22□□□□□ -1.09
SPEN-204ENST00000471538 TRIM27P14373 513 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 EIF4A2Q14240 407 aaKnown RBP8.22□□□□□ -1.09
SPEN-204ENST00000471538 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 BRINP3Q76B58 766 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 NUTM2AQ8IVF1 878 aaPredicted RBP8.22□□□□□ -1.09
SPEN-204ENST00000471538 DZIP1LQ8IYY4 767 aaKnown RBP8.22□□□□□ -1.09
SPEN-204ENST00000471538 PMFBP1Q8TBY8 1022 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 ZNF428Q96B54 188 aa8.22□□□□□ -1.09
SPEN-204ENST00000471538 SMC4Q9NTJ3 1288 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms