RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PGPEP1Q9NXJ5 209 aa3.71□□□□□ -1.82
UBXN4-207ENST00000471246 MINK1Q8N4C8 1332 aaPredicted RBP3.7□□□□□ -1.82
UBXN4-207ENST00000471246 IRF6O14896 467 aa3.7□□□□□ -1.82
UBXN4-207ENST00000471246 FDX1P10109 184 aa3.7□□□□□ -1.82
UBXN4-207ENST00000471246 RIPOR1Q6ZS17 1223 aa3.7□□□□□ -1.82
UBXN4-207ENST00000471246 LYSMD3Q7Z3D4 306 aa3.7□□□□□ -1.82
UBXN4-207ENST00000471246 PRR7Q8TB68 274 aa3.7□□□□□ -1.82
UBXN4-207ENST00000471246 ZC3H15Q8WU90 426 aaKnown RBP3.7□□□□□ -1.82
UBXN4-207ENST00000471246 NOP53Q9NZM5 478 aaKnown RBP3.7□□□□□ -1.82
UBXN4-207ENST00000471246 PIK3R2O00459 728 aa3.69□□□□□ -1.82
UBXN4-207ENST00000471246 AMPD1P23109 780 aa3.69□□□□□ -1.82
UBXN4-207ENST00000471246 DGKGP49619 791 aa3.69□□□□□ -1.82
UBXN4-207ENST00000471246 MDM2Q00987 491 aaPredicted RBP3.69□□□□□ -1.82
UBXN4-207ENST00000471246 DESI1Q6ICB0 168 aa3.69□□□□□ -1.82
UBXN4-207ENST00000471246 TRMT44Q8IYL2 757 aaKnown RBP3.69□□□□□ -1.82
UBXN4-207ENST00000471246 MAP10Q9P2G4 905 aa3.69□□□□□ -1.82
UBXN4-207ENST00000471246 ZMYND10O75800 440 aa3.68□□□□□ -1.82
UBXN4-207ENST00000471246 F12P00748 615 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-207ENST00000471246 BARGINQ6ZT62 677 aa3.68□□□□□ -1.82
UBXN4-207ENST00000471246 PRICKLE2Q7Z3G6 844 aa3.68□□□□□ -1.82
UBXN4-207ENST00000471246 BTBD6Q96KE9 485 aa3.68□□□□□ -1.82
UBXN4-207ENST00000471246 GDF2Q9UK05 429 aaPredicted RBP3.68□□□□□ -1.82
UBXN4-207ENST00000471246 H7C1W4 665 aa3.67□□□□□ -1.82
UBXN4-207ENST00000471246 JAG1P78504 1218 aa3.67□□□□□ -1.82
UBXN4-207ENST00000471246 LYPD8Q6UX82 237 aa3.67□□□□□ -1.82
UBXN4-207ENST00000471246 KRI1Q8N9T8 703 aaKnown RBP3.67□□□□□ -1.82
UBXN4-207ENST00000471246 BCANQ96GW7 911 aa3.67□□□□□ -1.82
UBXN4-207ENST00000471246 GPCPD1Q9NPB8 672 aa3.67□□□□□ -1.82
UBXN4-207ENST00000471246 CLCN1P35523 988 aa3.66□□□□□ -1.82
UBXN4-207ENST00000471246 GOLGA6L1Q8N7Z2 621 aa3.66□□□□□ -1.82
UBXN4-207ENST00000471246 KDF1Q8NAX2 398 aaPredicted RBP3.66□□□□□ -1.82
UBXN4-207ENST00000471246 TTLL12Q14166 644 aaPredicted RBP3.65□□□□□ -1.83
UBXN4-207ENST00000471246 AMHR2Q16671 573 aa3.65□□□□□ -1.83
UBXN4-207ENST00000471246 TRIM11Q96F44 468 aa3.65□□□□□ -1.83
UBXN4-207ENST00000471246 GAS2L1Q99501 681 aaPredicted RBP3.65□□□□□ -1.83
UBXN4-207ENST00000471246 FAM217BQ9NTX9 383 aaPredicted RBP3.65□□□□□ -1.83
UBXN4-207ENST00000471246 THBS1P07996 1170 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 SPATA31C1P0DKV0 1188 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 SLCO4C1Q6ZQN7 724 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 SH3BP5LQ7L8J4 393 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 NUTM1Q86Y26 1132 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 CFHR5Q9BXR6 569 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 DYRK1BQ9Y463 629 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 RNF114Q9Y508 228 aa3.64□□□□□ -1.83
UBXN4-207ENST00000471246 C2CD2LO14523 706 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 TRIM66O15016 1216 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 EPXP11678 715 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 ELNP15502 786 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 NDUFV2P19404 249 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 PTGIRP43119 386 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 RNF144AP50876 292 aaPredicted RBP3.63□□□□□ -1.83
UBXN4-207ENST00000471246 PARP9Q8IXQ6 854 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 CCER1Q8TC90 406 aaPredicted RBP3.63□□□□□ -1.83
UBXN4-207ENST00000471246 PLVAPQ9BX97 442 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 NUCKS1Q9H1E3 243 aaKnown RBP3.63□□□□□ -1.83
UBXN4-207ENST00000471246 GGA1Q9UJY5 639 aa3.63□□□□□ -1.83
UBXN4-207ENST00000471246 MAGEB6P1A0A0J9YX57 407 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 ADH1AP07327 375 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 H2AFB1P0C5Y9 115 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 H2AFB2P0C5Z0 115 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 TAL1P17542 331 aaPredicted RBP3.62□□□□□ -1.83
UBXN4-207ENST00000471246 ADD1P35611 737 aaKnown RBP3.62□□□□□ -1.83
UBXN4-207ENST00000471246 MTMR2Q13614 643 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 AK7Q96M32 723 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 SLC24A3Q9HC58 644 aa3.62□□□□□ -1.83
UBXN4-207ENST00000471246 SSTR3P32745 418 aaPredicted RBP3.61□□□□□ -1.83
UBXN4-207ENST00000471246 DHX9Q08211 1270 aaKnown RBP3.61□□□□□ -1.83
UBXN4-207ENST00000471246 ERFEQ4G0M1 354 aa3.61□□□□□ -1.83
UBXN4-207ENST00000471246 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
UBXN4-207ENST00000471246 KCTD15Q96SI1 283 aaPredicted RBP3.61□□□□□ -1.83
UBXN4-207ENST00000471246 SPDYE5A6NIY4 337 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 CFAP99D6REC4 459 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 IRAK1P51617 712 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 PDE4DQ08499 809 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 POU4F2Q12837 409 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 INTS6LQ5JSJ4 861 aaKnown RBP3.6□□□□□ -1.83
UBXN4-207ENST00000471246 TRIM52Q96A61 297 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 CARD14Q9BXL6 1004 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 TMPRSS4Q9NRS4 437 aa3.6□□□□□ -1.83
UBXN4-207ENST00000471246 MOXD2PA6NHM9 499 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 LILRA1O75019 489 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 CHSY3Q70JA7 882 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 RNF135Q8IUD6 432 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 SPIRE2Q8WWL2 714 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 BEGAINQ9BUH8 593 aa3.59□□□□□ -1.83
UBXN4-207ENST00000471246 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
UBXN4-207ENST00000471246 PER1O15534 1290 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-207ENST00000471246 APBA3O96018 575 aa3.58□□□□□ -1.84
UBXN4-207ENST00000471246 BMP4P12644 408 aa3.58□□□□□ -1.84
UBXN4-207ENST00000471246 UBAP2LQ14157 1087 aaKnown RBP3.58□□□□□ -1.84
UBXN4-207ENST00000471246 ZNF784Q8NCA9 323 aaPredicted RBP3.58□□□□□ -1.84
UBXN4-207ENST00000471246 RNF112Q9ULX5 631 aa3.58□□□□□ -1.84
UBXN4-207ENST00000471246 NEURL1BA8MQ27 555 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 F11P03951 625 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 CTBSQ01459 385 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 ARMC2Q8NEN0 867 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 TBC1D2Q9BYX2 928 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 PHF24Q9UPV7 400 aa3.57□□□□□ -1.84
UBXN4-207ENST00000471246 NBPF14Q5TI25 921 aa3.56□□□□□ -1.84
UBXN4-207ENST00000471246 RSBN1LQ6PCB5 846 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms