RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ITSN2Q9NZM3 1697 aa5.21□□□□□ -1.58
SORT1-202ENST00000466471 PXYLP1Q8TE99 480 aa5.2□□□□□ -1.58
SORT1-202ENST00000466471 NPHP4O75161 1426 aaPredicted RBP5.2□□□□□ -1.58
SORT1-202ENST00000466471 SPATA31A6Q5VVP1 1343 aa5.2□□□□□ -1.58
SORT1-202ENST00000466471 ZMYM3Q14202 1370 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 ABCC1P33527 1531 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 GDF9O60383 454 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 OATP04181 439 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 FECHP22830 423 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 PRR20EP86478 221 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 PRR20CP86479 221 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 PRR20DP86480 221 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 PRR20BP86481 221 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 PRR20AP86496 221 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 FOXC1Q12948 553 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 WWC1Q8IX03 1113 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.19□□□□□ -1.58
SORT1-202ENST00000466471 MLH3Q9UHC1 1453 aa5.19□□□□□ -1.58
SORT1-202ENST00000466471 MAP3K1Q13233 1512 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.18□□□□□ -1.58
SORT1-202ENST00000466471 MYO5CQ9NQX4 1742 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 ST8SIA5O15466 376 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 TMEM259Q4ZIN3 620 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 METTL3Q86U44 580 aaKnown RBP5.18□□□□□ -1.58
SORT1-202ENST00000466471 SPSB2Q99619 263 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 KIDINS220Q9ULH0 1771 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 ATP7AQ04656 1500 aa5.18□□□□□ -1.58
SORT1-202ENST00000466471 AHDC1Q5TGY3 1603 aaPredicted RBP5.17□□□□□ -1.58
SORT1-202ENST00000466471 SSTR3P32745 418 aaPredicted RBP5.17□□□□□ -1.58
SORT1-202ENST00000466471 C1QTNF8P60827 252 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 TUSC1Q2TAM9 212 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 RSPH4AQ5TD94 716 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 RDH13Q8NBN7 331 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 NLRP7Q8WX94 980 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 REPIN1Q9BWE0 567 aaKnown RBP5.17□□□□□ -1.58
SORT1-202ENST00000466471 ESF1Q9H501 851 aaKnown RBP5.17□□□□□ -1.58
SORT1-202ENST00000466471 PRM3Q9NNZ6 103 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 COG6Q9Y2V7 657 aa5.17□□□□□ -1.58
SORT1-202ENST00000466471 TIAM1Q13009 1591 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 DIP2AQ14689 1571 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 PLCH2O75038 1416 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 NUP153P49790 1475 aaKnown RBP5.16□□□□□ -1.58
SORT1-202ENST00000466471 TMCO4Q5TGY1 634 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 PPP2R2DQ66LE6 453 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 PKD2L1Q9P0L9 805 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 ZNF777Q9ULD5 760 aaPredicted RBP5.16□□□□□ -1.58
SORT1-202ENST00000466471 PLXNC1O60486 1568 aa5.16□□□□□ -1.58
SORT1-202ENST00000466471 DDX11L8A8MPP1 907 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 CCDC125Q86Z20 511 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 RGS22Q8NE09 1264 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 BEGAINQ9BUH8 593 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 FAM217BQ9NTX9 383 aaPredicted RBP5.15□□□□□ -1.59
SORT1-202ENST00000466471 ACIN1Q9UKV3 1341 aaKnown RBP5.15□□□□□ -1.59
SORT1-202ENST00000466471 CHD4Q14839 1912 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 ADGBQ8N7X0 1667 aa5.15□□□□□ -1.59
SORT1-202ENST00000466471 UNC13BO14795 1591 aa5.14□□□□□ -1.59
SORT1-202ENST00000466471 NUTM2BA6NNL0 878 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 NUTM2EB1AL46 878 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 CLK2P49760 499 aaKnown RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 RBM6P78332 1123 aaKnown RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 FUT2Q10981 343 aa5.14□□□□□ -1.59
SORT1-202ENST00000466471 MORN1Q5T089 497 aa5.14□□□□□ -1.59
SORT1-202ENST00000466471 NUTM2DQ5VT03 806 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 NUTM2AQ8IVF1 878 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 ZNF784Q8NCA9 323 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 AAASQ9NRG9 546 aa5.14□□□□□ -1.59
SORT1-202ENST00000466471 FCF1Q9Y324 198 aaKnown RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 ZNF330Q9Y3S2 320 aaPredicted RBP5.14□□□□□ -1.59
SORT1-202ENST00000466471 SPHKAPQ2M3C7 1700 aa5.14□□□□□ -1.59
SORT1-202ENST00000466471 SCAF11Q99590 1463 aaKnown RBP5.13□□□□□ -1.59
SORT1-202ENST00000466471 ABCC3O15438 1527 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 GJA5P36382 358 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 MDM2Q00987 491 aaPredicted RBP5.13□□□□□ -1.59
SORT1-202ENST00000466471 MEX3CQ5U5Q3 659 aaKnown RBP5.13□□□□□ -1.59
SORT1-202ENST00000466471 MYSM1Q5VVJ2 828 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 FAM160A2Q8N612 972 aaPredicted RBP5.13□□□□□ -1.59
SORT1-202ENST00000466471 RETREG2Q8NC44 543 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 THAP11Q96EK4 314 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 DACH1Q9UI36 760 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 USTQ9Y2C2 406 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 SLC27A5Q9Y2P5 690 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 AFF2P51816 1311 aa5.13□□□□□ -1.59
SORT1-202ENST00000466471 BLMP54132 1417 aaPredicted RBP5.13□□□□□ -1.59
SORT1-202ENST00000466471 SAMD9Q5K651 1589 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 UGGT1Q9NYU2 1555 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 KDM5AP29375 1690 aaKnown RBP5.12□□□□□ -1.59
SORT1-202ENST00000466471 CD2BP2O95400 341 aaKnown RBP5.12□□□□□ -1.59
SORT1-202ENST00000466471 ATP6V1AP38606 617 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 RFC5P40937 340 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 RPIAP49247 311 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 KCNA1Q09470 495 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 ANKLE2Q86XL3 938 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 AEBP1Q8IUX7 1158 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 POM121Q96HA1 1249 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 PHOX2BQ99453 314 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 PRDM9Q9NQV7 894 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 NLRP1Q9C000 1473 aa5.12□□□□□ -1.59
SORT1-202ENST00000466471 FMNL1O95466 1100 aaPredicted RBP5.11□□□□□ -1.59
SORT1-202ENST00000466471 GCGRP47871 477 aa5.11□□□□□ -1.59
SORT1-202ENST00000466471 MFAP1P55081 439 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms