RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 CAVIN1Q6NZI2 390 aaKnown RBP7.99□□□□□ -1.13
SIK3-207ENST00000465421 FTSJ3Q8IY81 847 aaKnown RBP7.99□□□□□ -1.13
SIK3-207ENST00000465421 MYRIPQ8NFW9 859 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 GPT2Q8TD30 523 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 KIF16BQ96L93 1317 aa7.99□□□□□ -1.13
SIK3-207ENST00000465421 SETD1BQ9UPS6 1966 aaKnown RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 XRN1Q8IZH2 1706 aaKnown RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 CCDC39Q9UFE4 941 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 CHGAP10645 457 aaKnown RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 CHD1LQ86WJ1 897 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 TEX2Q8IWB9 1127 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 GTPBP4Q9BZE4 634 aaKnown RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 ARHGAP23Q9P227 1491 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 MAP2P11137 1827 aaKnown RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
SIK3-207ENST00000465421 MCTP1Q6DN14 999 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 LRSAM1Q6UWE0 723 aa7.98□□□□□ -1.13
SIK3-207ENST00000465421 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
SIK3-207ENST00000465421 TBC1D9Q6ZT07 1266 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 FMN2Q9NZ56 1722 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 KIF20AO95235 890 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 ITPRIPQ8IWB1 547 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 MARF1Q9Y4F3 1742 aaKnown RBP7.97□□□□□ -1.13
SIK3-207ENST00000465421 PPIP5K1Q6PFW1 1433 aa7.97□□□□□ -1.13
SIK3-207ENST00000465421 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
SIK3-207ENST00000465421 NUCB2P80303 420 aa7.96□□□□□ -1.13
SIK3-207ENST00000465421 PKP1Q13835 747 aa7.96□□□□□ -1.13
SIK3-207ENST00000465421 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.96□□□□□ -1.13
SIK3-207ENST00000465421 TSR2Q969E8 191 aaKnown RBP7.96□□□□□ -1.13
SIK3-207ENST00000465421 DLG5Q8TDM6 1919 aa7.96□□□□□ -1.13
SIK3-207ENST00000465421 TMEM57Q8N5G2 664 aa7.96□□□□□ -1.14
SIK3-207ENST00000465421 SSH1Q8WYL5 1049 aa7.96□□□□□ -1.14
SIK3-207ENST00000465421 JARID2Q92833 1246 aaPredicted RBP7.96□□□□□ -1.14
SIK3-207ENST00000465421 LNPKQ9C0E8 428 aa7.96□□□□□ -1.14
SIK3-207ENST00000465421 SLC12A5Q9H2X9 1139 aa7.96□□□□□ -1.14
SIK3-207ENST00000465421 TMEM63CQ9P1W3 806 aa7.96□□□□□ -1.14
SIK3-207ENST00000465421 RBM27Q9P2N5 1060 aaKnown RBP7.96□□□□□ -1.14
SIK3-207ENST00000465421 FOXD4L5Q5VV16 416 aaPredicted RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 TMEM132EQ6IEE7 984 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 MPNDQ8N594 471 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 FOXD4L4Q8WXT5 416 aaPredicted RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 ZDHHC9Q9Y397 364 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 CEP170BQ9Y4F5 1589 aaPredicted RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 HMGN5P82970 282 aaKnown RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 ATP2B3Q16720 1220 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 PRIMPOLQ96LW4 560 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 EDC4Q6P2E9 1401 aaKnown RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 AATKQ6ZMQ8 1374 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 LETM1O95202 739 aaPredicted RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 IPO4Q8TEX9 1081 aaKnown RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 PLEKHF1Q96S99 279 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 SMC4Q9NTJ3 1288 aa7.95□□□□□ -1.14
SIK3-207ENST00000465421 NOB1Q9ULX3 412 aaKnown RBP7.95□□□□□ -1.14
SIK3-207ENST00000465421 IL16Q14005 1332 aa7.94□□□□□ -1.14
SIK3-207ENST00000465421 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
SIK3-207ENST00000465421 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
SIK3-207ENST00000465421 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.94□□□□□ -1.142e-6■■■■□ 20.5
SIK3-207ENST00000465421 ADAMTS13Q76LX8 1427 aa7.94□□□□□ -1.14
SIK3-207ENST00000465421 U2SURPO15042 1029 aaKnown RBP7.94□□□□□ -1.14
SIK3-207ENST00000465421 EXOSC9Q06265 439 aaKnown RBP7.94□□□□□ -1.14
SIK3-207ENST00000465421 KIAA2012Q0VF49 1180 aa7.94□□□□□ -1.14
SIK3-207ENST00000465421 SAFB2Q14151 953 aaKnown RBP eCLIP7.94□□□□□ -1.14
SIK3-207ENST00000465421 RABEP1Q15276 862 aa7.94□□□□□ -1.14
SIK3-207ENST00000465421 SYCE3A1L190 88 aa7.93□□□□□ -1.14
SIK3-207ENST00000465421 PRPF40AO75400 957 aaKnown RBP7.93□□□□□ -1.14
SIK3-207ENST00000465421 U2AF1L5P0DN76 240 aaPredicted RBP7.93□□□□□ -1.14
SIK3-207ENST00000465421 U2AF1Q01081 240 aaKnown RBP eCLIP7.93□□□□□ -1.14
SIK3-207ENST00000465421 CWC22Q9HCG8 908 aaKnown RBP7.93□□□□□ -1.14
SIK3-207ENST00000465421 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
SIK3-207ENST00000465421 PIBF1Q8WXW3 757 aa7.93□□□□□ -1.14
SIK3-207ENST00000465421 PLEKHG1Q9ULL1 1385 aa7.93□□□□□ -1.14
SIK3-207ENST00000465421 CDK11BP21127 795 aaKnown RBP7.93□□□□□ -1.14
SIK3-207ENST00000465421 TSC1Q92574 1164 aa7.93□□□□□ -1.14
SIK3-207ENST00000465421 GCC1Q96CN9 775 aa7.93□□□□□ -1.14
SIK3-207ENST00000465421 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 APBB1O00213 710 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 CBX1P83916 185 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 PTCH1Q13635 1447 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 PEAK1Q9H792 1746 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 C1orf115Q9H7X2 142 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 SPTLC3Q9NUV7 552 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 TRIM35Q9UPQ4 493 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 PIK3R4Q99570 1358 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 MLECQ14165 292 aa7.92□□□□□ -1.14
SIK3-207ENST00000465421 FOXD4L6Q3SYB3 417 aaPredicted RBP7.92□□□□□ -1.14
SIK3-207ENST00000465421 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
SIK3-207ENST00000465421 FBXO31Q5XUX0 539 aaPredicted RBP7.92□□□□□ -1.14
SIK3-207ENST00000465421 FOXD4L3Q6VB84 417 aaPredicted RBP7.92□□□□□ -1.14
SIK3-207ENST00000465421 CDC45O75419 566 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 GSPT1P15170 499 aaKnown RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 MTHFSP49914 203 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 CFAP53Q96M91 514 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 TMEM2Q9UHN6 1383 aa7.91□□□□□ -1.14
SIK3-207ENST00000465421 ELL2O00472 640 aaPredicted RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 BRPF1P55201 1214 aaPredicted RBP7.91□□□□□ -1.14
SIK3-207ENST00000465421 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms