RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 CNTNAP3Q9BZ76 1288 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 CEP126Q9P2H0 1117 aa3.77□□□□□ -1.81
NUCKS1-202ENST00000464938 ZIC2O95409 532 aaPredicted RBP3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 IRS1P35568 1242 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 SEMA3FQ13275 785 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 ERFEQ4G0M1 354 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 KANK3Q6NY19 840 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 BPHLQ86WA6 291 aaPredicted RBP3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 TRMT44Q8IYL2 757 aaKnown RBP3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 LINC00528Q8N1L1 170 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 ADAM32Q8TC27 787 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 FOXJ1Q92949 421 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 CCDC97Q96F63 343 aaPredicted RBP3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 ARHGAP9Q9BRR9 750 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 COL25A1Q9BXS0 654 aaPredicted RBP3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 PPP1R12CQ9BZL4 782 aa3.76□□□□□ -1.81
NUCKS1-202ENST00000464938 PALM3A6NDB9 673 aaPredicted RBP3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 ESPNB1AK53 854 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 PROCP04070 461 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 GRM5P41594 1212 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 C6orf118Q5T5N4 469 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 TBC1D9Q6ZT07 1266 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 ZNF592Q92610 1267 aa3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 TFIP11Q9UBB9 837 aaKnown RBP3.75□□□□□ -1.81
NUCKS1-202ENST00000464938 PIK3CDO00329 1044 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 ATP9BO43861 1147 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 PPP1R15AO75807 674 aaPredicted RBP3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 PTSQ03393 145 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 ZBTB33Q86T24 672 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 PLEKHM2Q8IWE5 1019 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 HOMEZQ8IX15 550 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 SVOPQ8N4V2 548 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 FAM174AQ8TBP5 190 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 ARID3AQ99856 593 aa3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 MAFBQ9Y5Q3 323 aaPredicted RBP3.74□□□□□ -1.81
NUCKS1-202ENST00000464938 LZTS3O60299 673 aaPredicted RBP3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 NR5A1Q13285 461 aa3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 KANK4Q5T7N3 995 aaPredicted RBP3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 CCDC125Q86Z20 511 aa3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 MAP4K5Q9Y4K4 846 aa3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 PCDHB9Q9Y5E1 797 aa3.73□□□□□ -1.81
NUCKS1-202ENST00000464938 SLC35F4A4IF30 521 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 GIGYF1O75420 1035 aaPredicted RBP3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.72□□□□□ -1.814e-33■□□□□ 9.2
NUCKS1-202ENST00000464938 MAP7D1Q3KQU3 841 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 PLA2G4EQ3MJ16 856 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 TSGA10IPQ3SY00 556 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 SEPT12Q8IYM1 358 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 PBXIP1Q96AQ6 731 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 SPOCK3Q9BQ16 436 aa3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 CDV3Q9UKY7 258 aaKnown RBP3.72□□□□□ -1.81
NUCKS1-202ENST00000464938 MAGEB6P1A0A0J9YX57 407 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 ATG7O95352 703 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 BMP2P12643 396 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 LMOD1P29536 600 aaPredicted RBP3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 DZIP3Q86Y13 1208 aaKnown RBP3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 RNF135Q8IUD6 432 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 KRTAP1-3Q8IUG1 177 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 CCDC155Q8N6L0 562 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 CCDC85AQ96PX6 553 aaPredicted RBP3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 PSMG3-AS1Q96PY0 264 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 CARD14Q9BXL6 1004 aa3.71□□□□□ -1.82
NUCKS1-202ENST00000464938 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L3A6NCW0 530 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L4A6NCW7 530 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 TTLL8A6PVC2 850 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L5A8MUK1 530 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 SKIP12755 728 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 ITGA6P23229 1130 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 ELOAQ14241 798 aaKnown RBP3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 AGERQ15109 404 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 SLFNL1Q499Z3 407 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 RNF20Q5VTR2 975 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L2Q6R6M4 530 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 LYPD4Q6UWN0 246 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 USP17L1Q7RTZ2 530 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 PLPP7Q8NBV4 271 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 SCARF2Q96GP6 870 aaPredicted RBP3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 DCAF5Q96JK2 942 aa3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 KCTD15Q96SI1 283 aaPredicted RBP3.7□□□□□ -1.82
NUCKS1-202ENST00000464938 SENP3-EIF4A1A0A087X0R7 540 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 MSTNO14793 375 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 ZBTB7BO15156 539 aaPredicted RBP3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 DKK1O94907 266 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 GAS6Q14393 721 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 NBPF20Q3BBV1 942 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 INTS6LQ5JSJ4 861 aaKnown RBP3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 SLC10A4Q96EP9 437 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 TSEN34Q9BSV6 310 aaKnown RBP3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 TRAIPQ9BWF2 469 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 VRTNQ9H8Y1 702 aa3.69□□□□□ -1.82
NUCKS1-202ENST00000464938 FAM196BA6NMK8 535 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 SPINT1O43278 529 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 UPP2O95045 317 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 ADAMTS2O95450 1211 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 CELA2BP08218 269 aaPredicted RBP3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 RFX1P22670 979 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 PTK7Q13308 1070 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 NCOA4Q13772 614 aa3.68□□□□□ -1.82
NUCKS1-202ENST00000464938 Q6ZVU0 165 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms