RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 NCBP3Q53F19 620 aaKnown RBP23.92■■□□□ 1.42
MBD1-208ENST00000398493 U2SURPO15042 1029 aaKnown RBP23.91■■□□□ 1.42
MBD1-208ENST00000398493 U2AF1L5P0DN76 240 aaPredicted RBP23.91■■□□□ 1.42
MBD1-208ENST00000398493 U2AF1Q01081 240 aaKnown RBP eCLIP23.91■■□□□ 1.42
MBD1-208ENST00000398493 AEBP1Q8IUX7 1158 aa23.91■■□□□ 1.42
MBD1-208ENST00000398493 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
MBD1-208ENST00000398493 TCP11L2Q8N4U5 519 aa23.89■■□□□ 1.42
MBD1-208ENST00000398493 GLI3P10071 1580 aa23.89■■□□□ 1.41
MBD1-208ENST00000398493 TRMT2AQ8IZ69 625 aaKnown RBP23.89■■□□□ 1.41
MBD1-208ENST00000398493 PNNQ9H307 717 aaKnown RBP23.89■■□□□ 1.41
MBD1-208ENST00000398493 TSHZ2Q9NRE2 1034 aa23.89■■□□□ 1.41
MBD1-208ENST00000398493 HMOX1P09601 288 aa23.88■■□□□ 1.41
MBD1-208ENST00000398493 B4GALNT3Q6L9W6 998 aa23.88■■□□□ 1.41
MBD1-208ENST00000398493 FAM98CQ17RN3 349 aaKnown RBP23.87■■□□□ 1.41
MBD1-208ENST00000398493 SULT6B1Q6IMI4 303 aa23.87■■□□□ 1.41
MBD1-208ENST00000398493 NCAPD2Q15021 1401 aa23.86■■□□□ 1.41
MBD1-208ENST00000398493 WWC1Q8IX03 1113 aa23.86■■□□□ 1.41
MBD1-208ENST00000398493 RGPD1P0DJD0 1748 aa23.86■■□□□ 1.41
MBD1-208ENST00000398493 FAM208AQ9UK61 1670 aaKnown RBP23.86■■□□□ 1.41
MBD1-208ENST00000398493 RBM6P78332 1123 aaKnown RBP23.85■■□□□ 1.41
MBD1-208ENST00000398493 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
MBD1-208ENST00000398493 CCDC27Q2M243 656 aa23.84■■□□□ 1.41
MBD1-208ENST00000398493 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.84■■□□□ 1.41
MBD1-208ENST00000398493 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
MBD1-208ENST00000398493 RXRBP28702 533 aa23.84■■□□□ 1.41
MBD1-208ENST00000398493 BARGINQ6ZT62 677 aa23.84■■□□□ 1.41
MBD1-208ENST00000398493 WDR63Q8IWG1 891 aa23.83■■□□□ 1.41
MBD1-208ENST00000398493 ONECUT3O60422 494 aaPredicted RBP23.82■■□□□ 1.4
MBD1-208ENST00000398493 KDRP35968 1356 aa23.82■■□□□ 1.4
MBD1-208ENST00000398493 DISP2A7MBM2 1401 aa23.82■■□□□ 1.4
MBD1-208ENST00000398493 MEGF6O75095 1541 aa23.81■■□□□ 1.4
MBD1-208ENST00000398493 IL2RBP14784 551 aa23.81■■□□□ 1.4
MBD1-208ENST00000398493 NEUROD2Q15784 382 aa23.81■■□□□ 1.4
MBD1-208ENST00000398493 RSPH6AQ9H0K4 717 aa23.8■■□□□ 1.4
MBD1-208ENST00000398493 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
MBD1-208ENST00000398493 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
MBD1-208ENST00000398493 RAPGEF4Q8WZA2 1011 aa23.78■■□□□ 1.4
MBD1-208ENST00000398493 RRP7AQ9Y3A4 280 aaKnown RBP23.77■■□□□ 1.4
MBD1-208ENST00000398493 A0A0G2JS52 829 aa23.77■■□□□ 1.4
MBD1-208ENST00000398493 PRKAR2BP31323 418 aa23.77■■□□□ 1.4
MBD1-208ENST00000398493 MYT1Q01538 1121 aa23.77■■□□□ 1.4
MBD1-208ENST00000398493 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
MBD1-208ENST00000398493 NEFMP07197 916 aa23.76■■□□□ 1.39
MBD1-208ENST00000398493 TATP17735 454 aaPredicted RBP23.76■■□□□ 1.39
MBD1-208ENST00000398493 EXOC6Q8TAG9 804 aa23.76■■□□□ 1.39
MBD1-208ENST00000398493 FCHSD2O94868 740 aa23.75■■□□□ 1.39
MBD1-208ENST00000398493 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
MBD1-208ENST00000398493 SOCS7O14512 581 aa23.75■■□□□ 1.39
MBD1-208ENST00000398493 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
MBD1-208ENST00000398493 OVOS2A0A0G2JMS6 1433 aa23.74■■□□□ 1.39
MBD1-208ENST00000398493 RGS12O14924 1447 aa23.74■■□□□ 1.39
MBD1-208ENST00000398493 CDCA7Q9BWT1 371 aaPredicted RBP23.74■■□□□ 1.39
MBD1-208ENST00000398493 THSD7AQ9UPZ6 1657 aa23.73■■□□□ 1.39
MBD1-208ENST00000398493 PLIN1O60240 522 aa23.73■■□□□ 1.39
MBD1-208ENST00000398493 MYH16Q9H6N6 1097 aa23.73■■□□□ 1.39
MBD1-208ENST00000398493 EXOC5O00471 708 aa23.72■■□□□ 1.39
MBD1-208ENST00000398493 DDB1Q16531 1140 aa23.72■■□□□ 1.39
MBD1-208ENST00000398493 WNK3Q9BYP7 1800 aa23.72■■□□□ 1.39
MBD1-208ENST00000398493 ZCRB1Q8TBF4 217 aaKnown RBP23.71■■□□□ 1.39
MBD1-208ENST00000398493 TMPOP42166 694 aaKnown RBP23.7■■□□□ 1.39
MBD1-208ENST00000398493 MTHFSDQ2M296 383 aaKnown RBP23.7■■□□□ 1.38
MBD1-208ENST00000398493 LRRC37A3O60309 1634 aa23.69■■□□□ 1.38
MBD1-208ENST00000398493 FAM182BQ5T319 152 aa23.68■■□□□ 1.38
MBD1-208ENST00000398493 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
MBD1-208ENST00000398493 EP400Q96L91 3159 aa23.68■■□□□ 1.38
MBD1-208ENST00000398493 CYP27B1O15528 508 aa23.68■■□□□ 1.38
MBD1-208ENST00000398493 PARP4Q9UKK3 1724 aaKnown RBP23.68■■□□□ 1.38
MBD1-208ENST00000398493 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
MBD1-208ENST00000398493 PLEKHO1Q53GL0 409 aaPredicted RBP23.67■■□□□ 1.38
MBD1-208ENST00000398493 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
MBD1-208ENST00000398493 CRBNQ96SW2 442 aa23.67■■□□□ 1.38
MBD1-208ENST00000398493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.67■■□□□ 1.381e-7■□□□□ 11
MBD1-208ENST00000398493 SPG7Q9UQ90 795 aa23.66■■□□□ 1.38
MBD1-208ENST00000398493 RIPK4P57078 832 aa23.65■■□□□ 1.38
MBD1-208ENST00000398493 AMOTQ4VCS5 1084 aa23.65■■□□□ 1.38
MBD1-208ENST00000398493 KRT27Q7Z3Y8 459 aa23.64■■□□□ 1.38
MBD1-208ENST00000398493 IL16Q14005 1332 aa23.64■■□□□ 1.37
MBD1-208ENST00000398493 ZNF530Q6P9A1 599 aaPredicted RBP23.63■■□□□ 1.37
MBD1-208ENST00000398493 PKD1L3Q7Z443 1732 aa23.63■■□□□ 1.37
MBD1-208ENST00000398493 SHANK3Q9BYB0 1731 aa23.63■■□□□ 1.37
MBD1-208ENST00000398493 BRWD3Q6RI45 1802 aa23.63■■□□□ 1.37
MBD1-208ENST00000398493 PCDH11XQ9BZA7 1347 aa23.62■■□□□ 1.37
MBD1-208ENST00000398493 PCDH11YQ9BZA8 1340 aa23.62■■□□□ 1.37
MBD1-208ENST00000398493 CT47B1P0C2W7 299 aaPredicted RBP23.62■■□□□ 1.37
MBD1-208ENST00000398493 PHKG2P15735 406 aa23.62■■□□□ 1.37
MBD1-208ENST00000398493 PLEKHG2Q9H7P9 1386 aa23.62■■□□□ 1.37
MBD1-208ENST00000398493 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
MBD1-208ENST00000398493 BCAR3O75815 825 aa23.6■■□□□ 1.37
MBD1-208ENST00000398493 IFNL2Q8IZJ0 200 aa23.6■■□□□ 1.37
MBD1-208ENST00000398493 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
MBD1-208ENST00000398493 GAS2L2Q8NHY3 880 aa23.59■■□□□ 1.37
MBD1-208ENST00000398493 CANXP27824 592 aaKnown RBP23.58■■□□□ 1.37
MBD1-208ENST00000398493 PDE3AQ14432 1141 aa23.58■■□□□ 1.37
MBD1-208ENST00000398493 AKAP4Q5JQC9 854 aa23.58■■□□□ 1.37
MBD1-208ENST00000398493 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
MBD1-208ENST00000398493 NFE2L2Q16236 605 aa23.57■■□□□ 1.36
MBD1-208ENST00000398493 MPRIPQ6WCQ1 1025 aa23.57■■□□□ 1.36
MBD1-208ENST00000398493 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
MBD1-208ENST00000398493 RARSP54136 660 aaKnown RBP23.56■■□□□ 1.36
MBD1-208ENST00000398493 C1orf141Q5JVX7 400 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms