RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 CC2D2AQ9P2K1 1620 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 USP5P45974 858 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 FCHSD2O94868 740 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 BLOC1S2Q6QNY1 142 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 DAPK1P53355 1430 aa12.28□□□□□ -0.44
COL4A6-203ENST00000394872 PTCD1O75127 700 aaKnown RBP12.27□□□□□ -0.44
COL4A6-203ENST00000394872 IL1RAPL2Q9NP60 686 aa12.27□□□□□ -0.44
COL4A6-203ENST00000394872 ABCF2Q9UG63 623 aa12.27□□□□□ -0.44
COL4A6-203ENST00000394872 DEF6Q9H4E7 631 aa12.27□□□□□ -0.44
COL4A6-203ENST00000394872 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.44
COL4A6-203ENST00000394872 CHD1LQ86WJ1 897 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 PDRG1Q9NUG6 133 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 NFE2L2Q16236 605 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 NBPF8Q3BBV2 869 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 AIDAQ96BJ3 306 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 TOPBP1Q92547 1522 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 SYNJ1O43426 1573 aa12.27□□□□□ -0.45
COL4A6-203ENST00000394872 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
COL4A6-203ENST00000394872 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
COL4A6-203ENST00000394872 PPFIBP1Q86W92 1011 aa12.26□□□□□ -0.45
COL4A6-203ENST00000394872 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
COL4A6-203ENST00000394872 CCDC61Q9Y6R9 512 aa12.26□□□□□ -0.45
COL4A6-203ENST00000394872 EPRSP07814 1512 aaKnown RBP12.26□□□□□ -0.45
COL4A6-203ENST00000394872 IBSPP21815 317 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-203ENST00000394872 JAKMIP1Q96N16 626 aaKnown RBP12.26□□□□□ -0.45
COL4A6-203ENST00000394872 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-203ENST00000394872 WAPLQ7Z5K2 1190 aa12.26□□□□□ -0.45
COL4A6-203ENST00000394872 SPC24Q8NBT2 197 aa12.25□□□□□ -0.45
COL4A6-203ENST00000394872 WDR33Q9C0J8 1336 aaKnown RBP12.25□□□□□ -0.45
COL4A6-203ENST00000394872 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
COL4A6-203ENST00000394872 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
COL4A6-203ENST00000394872 LUC7LQ9NQ29 371 aaKnown RBP12.25□□□□□ -0.45
COL4A6-203ENST00000394872 NOM1Q5C9Z4 860 aaKnown RBP12.25□□□□□ -0.45
COL4A6-203ENST00000394872 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
COL4A6-203ENST00000394872 KRT85P78386 507 aa12.25□□□□□ -0.45
COL4A6-203ENST00000394872 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-203ENST00000394872 NUTM1Q86Y26 1132 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 SEPT11Q9NVA2 429 aaKnown RBP12.24□□□□□ -0.45
COL4A6-203ENST00000394872 USHBP1Q8N6Y0 703 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 MYD88Q99836 296 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 AKAP2Q9Y2D5 859 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 MCM10Q7L590 875 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 CRACR2BQ8N4Y2 399 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-203ENST00000394872 K7ELQ4 463 aaPredicted RBP12.24□□□□□ -0.45
COL4A6-203ENST00000394872 ERLIN2O94905 339 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 KRT32Q14532 448 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 WASF1Q92558 559 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 CCDC192P0DO97 292 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 DUSP27Q5VZP5 1158 aa12.24□□□□□ -0.45
COL4A6-203ENST00000394872 NEFHP12036 1026 aa12.23□□□□□ -0.45
COL4A6-203ENST00000394872 ZNF287Q9HBT7 754 aa12.23□□□□□ -0.45
COL4A6-203ENST00000394872 TMPOP42166 694 aaKnown RBP12.23□□□□□ -0.45
COL4A6-203ENST00000394872 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
COL4A6-203ENST00000394872 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-203ENST00000394872 IFIT1P09914 478 aaKnown RBP12.22□□□□□ -0.45
COL4A6-203ENST00000394872 CEP57L1Q8IYX8 460 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-203ENST00000394872 SPATA32Q96LK8 384 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
COL4A6-203ENST00000394872 CCDC181Q5TID7 509 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 LARP1Q6PKG0 1096 aaKnown RBP12.22□□□□□ -0.45
COL4A6-203ENST00000394872 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 PKNOX2Q96KN3 472 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 MAP7D2Q96T17 732 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
COL4A6-203ENST00000394872 CDK13Q14004 1512 aaKnown RBP12.21□□□□□ -0.45
COL4A6-203ENST00000394872 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.45
COL4A6-203ENST00000394872 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
COL4A6-203ENST00000394872 DZIP1Q86YF9 867 aaKnown RBP12.21□□□□□ -0.45
COL4A6-203ENST00000394872 RPAP2Q8IXW5 612 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-203ENST00000394872 AMOTQ4VCS5 1084 aa12.21□□□□□ -0.45
COL4A6-203ENST00000394872 TNIP1Q15025 636 aa12.21□□□□□ -0.46
COL4A6-203ENST00000394872 CBFA2T2O43439 604 aa12.21□□□□□ -0.46
COL4A6-203ENST00000394872 CFAP45Q9UL16 551 aa12.21□□□□□ -0.46
COL4A6-203ENST00000394872 CHMP4BP1P59074 171 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 NGLY1Q96IV0 654 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 DESP17661 470 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 DHX8Q14562 1220 aaKnown RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 EXOC6BQ9Y2D4 811 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 SEPT7Q16181 437 aaKnown RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 AXDND1Q5T1B0 1012 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 CEP131Q9UPN4 1083 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 TIAM1Q13009 1591 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 H0YHG0 523 aa12.2□□□□□ -0.46
COL4A6-203ENST00000394872 ZNF219Q9P2Y4 722 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-203ENST00000394872 NEBLO76041 1014 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
COL4A6-203ENST00000394872 WDHD1O75717 1129 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms