RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ME1P48163 572 aa15.32■□□□□ 0.04
PTPRK-207ENST00000368226 STARD3NLO95772 234 aa15.32■□□□□ 0.04
PTPRK-207ENST00000368226 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-207ENST00000368226 ZNF396Q96N95 335 aaPredicted RBP15.32■□□□□ 0.04
PTPRK-207ENST00000368226 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 TRIM22Q8IYM9 498 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 MAGEC2Q9UBF1 373 aaPredicted RBP15.31■□□□□ 0.04
PTPRK-207ENST00000368226 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRK-207ENST00000368226 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 TSPY26PQ9H489 355 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 FBLN1P23142 703 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 CCDC141Q6ZP82 1450 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 KCNH5Q8NCM2 988 aa15.31■□□□□ 0.04
PTPRK-207ENST00000368226 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
PTPRK-207ENST00000368226 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
PTPRK-207ENST00000368226 RUFY1Q96T51 708 aa15.3■□□□□ 0.04
PTPRK-207ENST00000368226 UBAC1Q9BSL1 405 aa15.3■□□□□ 0.04
PTPRK-207ENST00000368226 ZPR1O75312 459 aa15.3■□□□□ 0.04
PTPRK-207ENST00000368226 LARP1BQ659C4 914 aaKnown RBP15.3■□□□□ 0.04
PTPRK-207ENST00000368226 GPTP24298 496 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 BOLA2Q9H3K6 86 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 AIDAQ96BJ3 306 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 C11orf95C9JLR9 678 aaPredicted RBP15.29■□□□□ 0.04
PTPRK-207ENST00000368226 PDCP20941 246 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 PHF8Q9UPP1 1060 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
PTPRK-207ENST00000368226 CHMP4BP1P59074 171 aa15.28■□□□□ 0.04
PTPRK-207ENST00000368226 MINDY4BA8MYZ0 360 aa15.28■□□□□ 0.04
PTPRK-207ENST00000368226 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
PTPRK-207ENST00000368226 JARID2Q92833 1246 aaPredicted RBP15.28■□□□□ 0.04
PTPRK-207ENST00000368226 CASTP20810 708 aaKnown RBP15.28■□□□□ 0.04
PTPRK-207ENST00000368226 NGLY1Q96IV0 654 aa15.28■□□□□ 0.04
PTPRK-207ENST00000368226 K7ELQ4 463 aaPredicted RBP15.27■□□□□ 0.04
PTPRK-207ENST00000368226 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 C20orf194Q5TEA3 1177 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 PAF1Q8N7H5 531 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 IDI1Q13907 227 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 NAIPQ13075 1403 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 SERPINC1P01008 464 aa15.27■□□□□ 0.04
PTPRK-207ENST00000368226 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.04
PTPRK-207ENST00000368226 WWC2Q6AWC2 1192 aa15.27■□□□□ 0.03
PTPRK-207ENST00000368226 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.03
PTPRK-207ENST00000368226 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.03
PTPRK-207ENST00000368226 MCM2P49736 904 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 HMGXB3Q12766 1538 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 FILIP1LQ4L180 1135 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 TNMDQ9H2S6 317 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
PTPRK-207ENST00000368226 ANKRD1Q15327 319 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 KIF14Q15058 1648 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 ZNF76P36508 570 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 SYCP1Q15431 976 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 CCDC82Q8N4S0 544 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 LARP6Q9BRS8 491 aaKnown RBP15.25■□□□□ 0.03
PTPRK-207ENST00000368226 TRMT112Q9UI30 125 aaKnown RBP15.25■□□□□ 0.03
PTPRK-207ENST00000368226 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
PTPRK-207ENST00000368226 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-207ENST00000368226 PRPF40BQ6NWY9 871 aaKnown RBP15.24■□□□□ 0.03
PTPRK-207ENST00000368226 FAM177A1Q8N128 213 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-207ENST00000368226 SETQ01105 290 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-207ENST00000368226 PDCL3Q9H2J4 239 aa15.24■□□□□ 0.03
PTPRK-207ENST00000368226 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
PTPRK-207ENST00000368226 KRT28Q7Z3Y7 464 aa15.24■□□□□ 0.03
PTPRK-207ENST00000368226 ABCC5O15440 1437 aa15.24■□□□□ 0.03
PTPRK-207ENST00000368226 MATR3P43243 847 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■■□□ 19
PTPRK-207ENST00000368226 MRE11P49959 708 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 NOS1P29475 1434 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 POLR3DP05423 398 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-207ENST00000368226 LRRFIP2Q9Y608 721 aaKnown RBP15.23■□□□□ 0.03
PTPRK-207ENST00000368226 FAM135AQ9P2D6 1515 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 CT47B1P0C2W7 299 aaPredicted RBP15.23■□□□□ 0.03
PTPRK-207ENST00000368226 FERMT3Q86UX7 667 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 MBD3O95983 291 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 IMMTQ16891 758 aaKnown RBP15.23■□□□□ 0.03
PTPRK-207ENST00000368226 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 SPATA32Q96LK8 384 aa15.23■□□□□ 0.03
PTPRK-207ENST00000368226 SEPT11Q9NVA2 429 aaKnown RBP15.22■□□□□ 0.03
PTPRK-207ENST00000368226 ZNF652Q9Y2D9 606 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 LETM1O95202 739 aaPredicted RBP15.22■□□□□ 0.03
PTPRK-207ENST00000368226 MX1P20591 662 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
PTPRK-207ENST00000368226 CCDC83Q8IWF9 413 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 AK7Q96M32 723 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 ANXA1P04083 346 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 IFIT1P09914 478 aaKnown RBP15.22■□□□□ 0.03
PTPRK-207ENST00000368226 JMYQ8N9B5 988 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 CAVIN4Q5BKX8 364 aa15.22■□□□□ 0.03
PTPRK-207ENST00000368226 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms