RNA–Protein interactions for RNA: ENST00000368198.7

SH2D2A-201, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-201ENST00000368198 LARP1Q6PKG0 1096 aaKnown RBP23.58■■□□□ 1.37
SH2D2A-201ENST00000368198 UNC5CLQ8IV45 518 aa23.58■■□□□ 1.37
SH2D2A-201ENST00000368198 EXOC6Q8TAG9 804 aa23.58■■□□□ 1.37
SH2D2A-201ENST00000368198 NWD2Q9ULI1 1742 aa23.57■■□□□ 1.36
SH2D2A-201ENST00000368198 CCDC136Q96JN2 1154 aa23.57■■□□□ 1.36
SH2D2A-201ENST00000368198 NRAPQ86VF7 1730 aa23.57■■□□□ 1.36
SH2D2A-201ENST00000368198 RGPD1P0DJD0 1748 aa23.56■■□□□ 1.36
SH2D2A-201ENST00000368198 WDR17Q8IZU2 1322 aa23.56■■□□□ 1.36
SH2D2A-201ENST00000368198 PHACTR3Q96KR7 559 aa23.55■■□□□ 1.36
SH2D2A-201ENST00000368198 CT47B1P0C2W7 299 aaPredicted RBP23.54■■□□□ 1.36
SH2D2A-201ENST00000368198 NBPF6Q5VWK0 638 aa23.54■■□□□ 1.36
SH2D2A-201ENST00000368198 NBPF4Q96M43 638 aa23.54■■□□□ 1.36
SH2D2A-201ENST00000368198 NLRP2Q9NX02 1062 aa23.54■■□□□ 1.36
SH2D2A-201ENST00000368198 RGPD2P0DJD1 1756 aa23.53■■□□□ 1.36
SH2D2A-201ENST00000368198 TOM1L2Q6ZVM7 507 aa23.53■■□□□ 1.36
SH2D2A-201ENST00000368198 EYA1Q99502 592 aa23.53■■□□□ 1.36
SH2D2A-201ENST00000368198 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
SH2D2A-201ENST00000368198 FANCIQ9NVI1 1328 aa23.52■■□□□ 1.36
SH2D2A-201ENST00000368198 CALD1Q05682 793 aaKnown RBP23.52■■□□□ 1.36
SH2D2A-201ENST00000368198 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
SH2D2A-201ENST00000368198 CRBNQ96SW2 442 aa23.52■■□□□ 1.36
SH2D2A-201ENST00000368198 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
SH2D2A-201ENST00000368198 CCDC9Q9Y3X0 531 aaKnown RBP23.51■■□□□ 1.35
SH2D2A-201ENST00000368198 BCAR3O75815 825 aa23.5■■□□□ 1.35
SH2D2A-201ENST00000368198 VPS72Q15906 364 aa23.5■■□□□ 1.35
SH2D2A-201ENST00000368198 SULT6B1Q6IMI4 303 aa23.5■■□□□ 1.35
SH2D2A-201ENST00000368198 RGS17Q9UGC6 210 aaPredicted RBP23.5■■□□□ 1.35
SH2D2A-201ENST00000368198 CRB1P82279 1406 aa23.5■■□□□ 1.35
SH2D2A-201ENST00000368198 QTRT2Q9H974 415 aaKnown RBP23.49■■□□□ 1.35
SH2D2A-201ENST00000368198 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.49■■□□□ 1.35
SH2D2A-201ENST00000368198 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 C20orf194Q5TEA3 1177 aa23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 SPATA31A5Q5VU36 1347 aa23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 SPATA31A7Q8IWB4 1347 aa23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
SH2D2A-201ENST00000368198 SPATA31A1Q5TZJ5 1347 aa23.47■■□□□ 1.35
SH2D2A-201ENST00000368198 ZNF772Q68DY9 489 aaPredicted RBP23.47■■□□□ 1.35
SH2D2A-201ENST00000368198 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
SH2D2A-201ENST00000368198 TRPC5Q9UL62 973 aaPredicted RBP23.47■■□□□ 1.35
SH2D2A-201ENST00000368198 ATRNO75882 1429 aa23.47■■□□□ 1.35
SH2D2A-201ENST00000368198 TSR2Q969E8 191 aaKnown RBP23.46■■□□□ 1.35
SH2D2A-201ENST00000368198 FAM208AQ9UK61 1670 aaKnown RBP23.46■■□□□ 1.35
SH2D2A-201ENST00000368198 DLG5Q8TDM6 1919 aa23.45■■□□□ 1.34
SH2D2A-201ENST00000368198 PDE3AQ14432 1141 aa23.44■■□□□ 1.34
SH2D2A-201ENST00000368198 KDRP35968 1356 aa23.44■■□□□ 1.34
SH2D2A-201ENST00000368198 EXOSC9Q06265 439 aaKnown RBP23.44■■□□□ 1.34
SH2D2A-201ENST00000368198 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
SH2D2A-201ENST00000368198 TSHZ2Q9NRE2 1034 aa23.44■■□□□ 1.34
SH2D2A-201ENST00000368198 IFT57Q9NWB7 429 aa23.43■■□□□ 1.34
SH2D2A-201ENST00000368198 GNAI1P63096 354 aa23.42■■□□□ 1.34
SH2D2A-201ENST00000368198 POTEAQ6S8J7 498 aa23.42■■□□□ 1.34
SH2D2A-201ENST00000368198 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
SH2D2A-201ENST00000368198 CANXP27824 592 aaKnown RBP23.41■■□□□ 1.34
SH2D2A-201ENST00000368198 GLI3P10071 1580 aa23.4■■□□□ 1.34
SH2D2A-201ENST00000368198 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
SH2D2A-201ENST00000368198 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
SH2D2A-201ENST00000368198 THRAP3Q9Y2W1 955 aaKnown RBP23.39■■□□□ 1.33
SH2D2A-201ENST00000368198 ZNF428Q96B54 188 aa23.37■■□□□ 1.33
SH2D2A-201ENST00000368198 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
SH2D2A-201ENST00000368198 MEGF6O75095 1541 aa23.36■■□□□ 1.33
SH2D2A-201ENST00000368198 IL2RBP14784 551 aa23.36■■□□□ 1.33
SH2D2A-201ENST00000368198 BARGINQ6ZT62 677 aa23.36■■□□□ 1.33
SH2D2A-201ENST00000368198 RAPGEF4Q8WZA2 1011 aa23.36■■□□□ 1.33
SH2D2A-201ENST00000368198 CFAP44Q96MT7 982 aa23.36■■□□□ 1.33
SH2D2A-201ENST00000368198 RBM6P78332 1123 aaKnown RBP23.35■■□□□ 1.33
SH2D2A-201ENST00000368198 FRAT1Q92837 279 aaPredicted RBP23.35■■□□□ 1.33
SH2D2A-201ENST00000368198 TATP17735 454 aaPredicted RBP23.35■■□□□ 1.33
SH2D2A-201ENST00000368198 LAS1LQ9Y4W2 734 aaKnown RBP23.35■■□□□ 1.33
SH2D2A-201ENST00000368198 DISP2A7MBM2 1401 aa23.34■■□□□ 1.33
SH2D2A-201ENST00000368198 RXRBP28702 533 aa23.34■■□□□ 1.33
SH2D2A-201ENST00000368198 MS4A1P11836 297 aa23.33■■□□□ 1.33
SH2D2A-201ENST00000368198 ALDH1L2Q3SY69 923 aa23.33■■□□□ 1.33
SH2D2A-201ENST00000368198 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
SH2D2A-201ENST00000368198 BCL2L13Q9BXK5 485 aa23.33■■□□□ 1.33
SH2D2A-201ENST00000368198 SMC4Q9NTJ3 1288 aa23.33■■□□□ 1.33
SH2D2A-201ENST00000368198 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 SSH1Q8WYL5 1049 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 WNK3Q9BYP7 1800 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 A0A0G2JS52 829 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 MYT1Q01538 1121 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 AAMPQ13685 434 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 MTHFSDQ2M296 383 aaKnown RBP23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 ZKSCAN2Q63HK3 967 aa23.31■■□□□ 1.32
SH2D2A-201ENST00000368198 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
SH2D2A-201ENST00000368198 PANK1Q8TE04 598 aa23.3■■□□□ 1.32
SH2D2A-201ENST00000368198 DCTN1Q14203 1278 aa23.29■■□□□ 1.32
SH2D2A-201ENST00000368198 CDCA7Q9BWT1 371 aaPredicted RBP23.29■■□□□ 1.32
SH2D2A-201ENST00000368198 HTATSF1O43719 755 aaKnown RBP23.28■■□□□ 1.32
SH2D2A-201ENST00000368198 SEPT12Q8IYM1 358 aa23.28■■□□□ 1.32
SH2D2A-201ENST00000368198 ZCRB1Q8TBF4 217 aaKnown RBP23.28■■□□□ 1.32
SH2D2A-201ENST00000368198 KIF16BQ96L93 1317 aa23.28■■□□□ 1.32
SH2D2A-201ENST00000368198 PARP4Q9UKK3 1724 aaKnown RBP23.28■■□□□ 1.32
SH2D2A-201ENST00000368198 EXOC5O00471 708 aa23.27■■□□□ 1.32
SH2D2A-201ENST00000368198 BRPF1P55201 1214 aaPredicted RBP23.27■■□□□ 1.32
SH2D2A-201ENST00000368198 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
SH2D2A-201ENST00000368198 THSD7AQ9UPZ6 1657 aa23.27■■□□□ 1.32
SH2D2A-201ENST00000368198 RTF1Q92541 710 aaKnown RBP23.27■■□□□ 1.32
SH2D2A-201ENST00000368198 COG6Q9Y2V7 657 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms