RNA–Protein interactions for RNA: ENST00000367537.7

SMG7-202, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMG7, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-202ENST00000367537 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
SMG7-202ENST00000367537 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
SMG7-202ENST00000367537 GNL3LQ9NVN8 582 aaKnown RBP10.08□□□□□ -0.8
SMG7-202ENST00000367537 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
SMG7-202ENST00000367537 C16orf71Q8IYS4 520 aaPredicted RBP10.07□□□□□ -0.8
SMG7-202ENST00000367537 CABP4P57796 275 aa10.07□□□□□ -0.8
SMG7-202ENST00000367537 PLCH2O75038 1416 aa10.07□□□□□ -0.8
SMG7-202ENST00000367537 ZSCAN25Q6NSZ9 544 aa10.07□□□□□ -0.8
SMG7-202ENST00000367537 OLFM4Q6UX06 510 aa10.07□□□□□ -0.8
SMG7-202ENST00000367537 CHD1LQ86WJ1 897 aa10.07□□□□□ -0.8
SMG7-202ENST00000367537 ZNF396Q96N95 335 aaPredicted RBP10.07□□□□□ -0.8
SMG7-202ENST00000367537 CCDC39Q9UFE4 941 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 WDR7Q9Y4E6 1490 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 HSP90AA2PQ14568 343 aaPredicted RBP10.06□□□□□ -0.8
SMG7-202ENST00000367537 SDF4Q9BRK5 362 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 CYP46A1Q9Y6A2 500 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 F6X3S4 739 aa10.06□□□□□ -0.8
SMG7-202ENST00000367537 TRAK2O60296 914 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 CHAMP1Q96JM3 812 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 FANCAO15360 1455 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 WDR33Q9C0J8 1336 aaKnown RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 KINO60870 393 aaKnown RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 NASPP49321 788 aaPredicted RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
SMG7-202ENST00000367537 NACAP1Q9BZK3 213 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 KRT32Q14532 448 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 FAM43AQ8N2R8 423 aa10.05□□□□□ -0.8
SMG7-202ENST00000367537 ZSCAN31Q96LW9 406 aaPredicted RBP10.04□□□□□ -0.8
SMG7-202ENST00000367537 GNAT3A8MTJ3 354 aa10.04□□□□□ -0.8
SMG7-202ENST00000367537 CCDC27Q2M243 656 aa10.04□□□□□ -0.8
SMG7-202ENST00000367537 K7ELQ4 463 aaPredicted RBP10.04□□□□□ -0.8
SMG7-202ENST00000367537 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
SMG7-202ENST00000367537 CCDC43Q96MW1 224 aaKnown RBP10.04□□□□□ -0.8
SMG7-202ENST00000367537 DNAJC2Q99543 621 aaKnown RBP10.04□□□□□ -0.8
SMG7-202ENST00000367537 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
SMG7-202ENST00000367537 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
SMG7-202ENST00000367537 C8orf58Q8NAV2 365 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 TRIM35Q9UPQ4 493 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 TTC39AQ5SRH9 613 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 PRDM11Q9NQV5 511 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 CCAR2Q8N163 923 aaKnown RBP10.03□□□□□ -0.8
SMG7-202ENST00000367537 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
SMG7-202ENST00000367537 RAD21O60216 631 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 TNNT3P45378 269 aaPredicted RBP10.03□□□□□ -0.8
SMG7-202ENST00000367537 OTUD7AQ8TE49 926 aaPredicted RBP10.03□□□□□ -0.8
SMG7-202ENST00000367537 ARGLU1Q9NWB6 273 aaPredicted RBP10.03□□□□□ -0.8
SMG7-202ENST00000367537 CCP110O43303 1012 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 TXLNAP40222 546 aa10.03□□□□□ -0.8
SMG7-202ENST00000367537 USP19O94966 1318 aa10.02□□□□□ -0.8
SMG7-202ENST00000367537 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.8
SMG7-202ENST00000367537 RAB11FIP3O75154 756 aa10.02□□□□□ -0.8
SMG7-202ENST00000367537 BTBD11A6QL63 1104 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 MCM4P33991 863 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 SRGAP3O43295 1099 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 MTERF4Q7Z6M4 381 aaKnown RBP10.02□□□□□ -0.81
SMG7-202ENST00000367537 TBC1D32Q96NH3 1257 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 TRMT2AQ8IZ69 625 aaKnown RBP10.02□□□□□ -0.81
SMG7-202ENST00000367537 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 ASXL1Q8IXJ9 1541 aa10.02□□□□□ -0.81
SMG7-202ENST00000367537 FOXO3O43524 673 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 CEP126Q9P2H0 1117 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 TTC21BQ7Z4L5 1316 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.01□□□□□ -0.811e-5■■■■□ 25.8
SMG7-202ENST00000367537 FBXW7Q969H0 707 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 TSPY26PQ9H489 355 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 BLMP54132 1417 aaPredicted RBP10.01□□□□□ -0.81
SMG7-202ENST00000367537 CDKL5O76039 1030 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 HSP90AB2PQ58FF8 381 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
SMG7-202ENST00000367537 KRT85P78386 507 aa10.01□□□□□ -0.81
SMG7-202ENST00000367537 IL16Q14005 1332 aa10□□□□□ -0.81
SMG7-202ENST00000367537 WASLO00401 505 aaPredicted RBP10□□□□□ -0.81
SMG7-202ENST00000367537 STK38Q15208 465 aa10□□□□□ -0.81
SMG7-202ENST00000367537 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
SMG7-202ENST00000367537 STRN4Q9NRL3 753 aa10□□□□□ -0.81
SMG7-202ENST00000367537 MAP4K4O95819 1239 aaPredicted RBP10□□□□□ -0.81
SMG7-202ENST00000367537 CCDC173Q0VFZ6 552 aa10□□□□□ -0.81
SMG7-202ENST00000367537 BLOC1S2Q6QNY1 142 aa10□□□□□ -0.81
SMG7-202ENST00000367537 KDM5DQ9BY66 1539 aa10□□□□□ -0.81
SMG7-202ENST00000367537 TEX35Q5T0J7 233 aa10□□□□□ -0.81
SMG7-202ENST00000367537 ITSN2Q9NZM3 1697 aa10□□□□□ -0.81
SMG7-202ENST00000367537 FILIP1LQ4L180 1135 aa10□□□□□ -0.81
SMG7-202ENST00000367537 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
SMG7-202ENST00000367537 CAVIN1Q6NZI2 390 aaKnown RBP10□□□□□ -0.81
SMG7-202ENST00000367537 MNS1Q8NEH6 495 aa10□□□□□ -0.81
SMG7-202ENST00000367537 ANKRD36BQ8N2N9 1353 aa9.99□□□□□ -0.81
SMG7-202ENST00000367537 GLRX3O76003 335 aaKnown RBP9.99□□□□□ -0.81
SMG7-202ENST00000367537 CDR1P51861 262 aa9.99□□□□□ -0.81
SMG7-202ENST00000367537 LARP1Q6PKG0 1096 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms