RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 BCL2L13Q9BXK5 485 aa10.15□□□□□ -0.78
SKA2-201ENST00000330137 RIOK3O14730 519 aaKnown RBP10.14□□□□□ -0.79
SKA2-201ENST00000330137 U2AF2P26368 475 aaKnown RBP eCLIP10.14□□□□□ -0.79
SKA2-201ENST00000330137 SSH1Q8WYL5 1049 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 KDM4AO75164 1064 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 REC8O95072 547 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 CUL4AQ13619 759 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 CCDC183Q5T5S1 534 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 KRT222Q8N1A0 295 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 ZNF830Q96NB3 372 aaPredicted RBP10.14□□□□□ -0.79
SKA2-201ENST00000330137 NOB1Q9ULX3 412 aaKnown RBP10.14□□□□□ -0.79
SKA2-201ENST00000330137 PTCH1Q13635 1447 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 ADCY5O95622 1261 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 YY1AP1Q9H869 796 aa10.14□□□□□ -0.79
SKA2-201ENST00000330137 SETBP1Q9Y6X0 1596 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 SPDYE4A6NLX3 237 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SKA2-201ENST00000330137 SLFNL1Q499Z3 407 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 ANKRD45Q5TZF3 282 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 MORC1Q86VD1 984 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 ARHGEF40Q8TER5 1519 aa10.13□□□□□ -0.79
SKA2-201ENST00000330137 SPAG9O60271 1321 aaKnown RBP10.13□□□□□ -0.79
SKA2-201ENST00000330137 HECW2Q9P2P5 1572 aa10.12□□□□□ -0.79
SKA2-201ENST00000330137 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
SKA2-201ENST00000330137 NCBP1Q09161 790 aaKnown RBP10.12□□□□□ -0.79
SKA2-201ENST00000330137 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
SKA2-201ENST00000330137 EXOSC9Q06265 439 aaKnown RBP10.12□□□□□ -0.79
SKA2-201ENST00000330137 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
SKA2-201ENST00000330137 CHRM1P11229 460 aaPredicted RBP10.11□□□□□ -0.79
SKA2-201ENST00000330137 MX1P20591 662 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 KCNJ4P48050 445 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 PKP1Q13835 747 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 TTC22Q5TAA0 569 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 RNF214Q8ND24 703 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 ANAPC15P60006 121 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 KIF18AQ8NI77 898 aa10.11□□□□□ -0.79
SKA2-201ENST00000330137 TEX2Q8IWB9 1127 aa10.1□□□□□ -0.79
SKA2-201ENST00000330137 NSFL1CQ9UNZ2 370 aaKnown RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
SKA2-201ENST00000330137 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
SKA2-201ENST00000330137 ZNF397Q8NF99 534 aaPredicted RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
SKA2-201ENST00000330137 TSC1Q92574 1164 aa10.09□□□□□ -0.79
SKA2-201ENST00000330137 NRXN1Q9ULB1 1477 aa10.09□□□□□ -0.79
SKA2-201ENST00000330137 IRX3P78415 501 aaPredicted RBP10.09□□□□□ -0.79
SKA2-201ENST00000330137 CTR9Q6PD62 1173 aa10.09□□□□□ -0.79
SKA2-201ENST00000330137 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.09□□□□□ -0.79
SKA2-201ENST00000330137 PLEKHM2Q8IWE5 1019 aa10.09□□□□□ -0.79
SKA2-201ENST00000330137 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
SKA2-201ENST00000330137 ZGPATQ8N5A5 531 aaKnown RBP10.09□□□□□ -0.79
SKA2-201ENST00000330137 PLEKHF1Q96S99 279 aa10.09□□□□□ -0.79
SKA2-201ENST00000330137 RTL1A6NKG5 1358 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
SKA2-201ENST00000330137 DCTPP1Q9H773 170 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 IFT172Q9UG01 1749 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 ABCC4O15439 1325 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
SKA2-201ENST00000330137 UBE2HP62256 183 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 FUCA2Q9BTY2 467 aa10.08□□□□□ -0.8
SKA2-201ENST00000330137 TET3O43151 1660 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 MLH3Q9UHC1 1453 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
SKA2-201ENST00000330137 ATP6V1DQ9Y5K8 247 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 DIP2CQ9Y2E4 1556 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 ATP7AQ04656 1500 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 RAD50Q92878 1312 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 ERC2O15083 957 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 MTHFSP49914 203 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 TMX3Q96JJ7 454 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 KIDINS220Q9ULH0 1771 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 DEPDC5O75140 1603 aa10.07□□□□□ -0.8
SKA2-201ENST00000330137 CCDC112Q8NEF3 446 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 KIF1BPQ96EK5 621 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.06□□□□□ -0.8
SKA2-201ENST00000330137 CDC42BPGQ6DT37 1551 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 NEMFO60524 1076 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 MCCP23508 829 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 CYP2C19P33261 490 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 FAM135BQ49AJ0 1406 aa10.06□□□□□ -0.8
SKA2-201ENST00000330137 RPAP1Q9BWH6 1393 aaPredicted RBP10.05□□□□□ -0.8
SKA2-201ENST00000330137 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
SKA2-201ENST00000330137 RGS12O14924 1447 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 CCDC171Q6TFL3 1326 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 SIGLEC1Q9BZZ2 1709 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 KIF2AO00139 706 aaPredicted RBP10.05□□□□□ -0.8
SKA2-201ENST00000330137 TUBB4AP04350 444 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 USP48Q86UV5 1035 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 PYCARDQ9ULZ3 195 aa10.05□□□□□ -0.8
SKA2-201ENST00000330137 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms