RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 TIGD1Q96MW7 591 aa18.12■□□□□ 0.49
KDM3A-201ENST00000312912 IQGAP2Q13576 1575 aa18.12■□□□□ 0.49
KDM3A-201ENST00000312912 SLC3A2P08195 630 aaKnown RBP18.12■□□□□ 0.49
KDM3A-201ENST00000312912 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
KDM3A-201ENST00000312912 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
KDM3A-201ENST00000312912 RRS1Q15050 365 aaKnown RBP18.11■□□□□ 0.49
KDM3A-201ENST00000312912 TTC39AQ5SRH9 613 aa18.11■□□□□ 0.49
KDM3A-201ENST00000312912 AACSQ86V21 672 aa18.11■□□□□ 0.49
KDM3A-201ENST00000312912 JAKMIP1Q96N16 626 aaKnown RBP18.11■□□□□ 0.49
KDM3A-201ENST00000312912 SIL1Q9H173 461 aa18.11■□□□□ 0.49
KDM3A-201ENST00000312912 STK3Q13188 491 aa18.11■□□□□ 0.49
KDM3A-201ENST00000312912 CTNNA3Q9UI47 895 aa18.11■□□□□ 0.49
KDM3A-201ENST00000312912 CCDC141Q6ZP82 1450 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 SPATA32Q96LK8 384 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 CNNM1Q9NRU3 951 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 GTPBP4Q9BZE4 634 aaKnown RBP18.1■□□□□ 0.49
KDM3A-201ENST00000312912 NACAP1Q9BZK3 213 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 ABCC5O15440 1437 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
KDM3A-201ENST00000312912 SERPINC1P01008 464 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 CAGE1Q8TC20 777 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 DACH1Q9UI36 760 aa18.1■□□□□ 0.49
KDM3A-201ENST00000312912 CDK13Q14004 1512 aaKnown RBP18.09■□□□□ 0.49
KDM3A-201ENST00000312912 EPS15P42566 896 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 RRP12Q5JTH9 1297 aaKnown RBP18.09■□□□□ 0.49
KDM3A-201ENST00000312912 GIMAP7Q8NHV1 300 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 CWC27Q6UX04 472 aaKnown RBP18.09■□□□□ 0.49
KDM3A-201ENST00000312912 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 EXOC6BQ9Y2D4 811 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
KDM3A-201ENST00000312912 PLB1Q6P1J6 1458 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 GLRX3O76003 335 aaKnown RBP18.09■□□□□ 0.49
KDM3A-201ENST00000312912 CEP57L1Q8IYX8 460 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 CEP126Q9P2H0 1117 aa18.09■□□□□ 0.49
KDM3A-201ENST00000312912 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.49
KDM3A-201ENST00000312912 GNL3LQ9NVN8 582 aaKnown RBP18.08■□□□□ 0.49
KDM3A-201ENST00000312912 MAGEC2Q9UBF1 373 aaPredicted RBP18.08■□□□□ 0.49
KDM3A-201ENST00000312912 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
KDM3A-201ENST00000312912 GPATCH11Q8N954 259 aa18.08■□□□□ 0.48
KDM3A-201ENST00000312912 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
KDM3A-201ENST00000312912 MAP4K4O95819 1239 aaPredicted RBP18.07■□□□□ 0.48
KDM3A-201ENST00000312912 CABP4P57796 275 aa18.07■□□□□ 0.48
KDM3A-201ENST00000312912 CT47A1Q5JQC4 288 aaPredicted RBP18.07■□□□□ 0.48
KDM3A-201ENST00000312912 RAB11FIP3O75154 756 aa18.07■□□□□ 0.48
KDM3A-201ENST00000312912 CDKL5O76039 1030 aa18.07■□□□□ 0.48
KDM3A-201ENST00000312912 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
KDM3A-201ENST00000312912 MX1P20591 662 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 CCDC57Q2TAC2 916 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 KDM4AO75164 1064 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
KDM3A-201ENST00000312912 ZNHIT6Q9NWK9 470 aaKnown RBP18.06■□□□□ 0.48
KDM3A-201ENST00000312912 RPRD2Q5VT52 1461 aaKnown RBP18.06■□□□□ 0.48
KDM3A-201ENST00000312912 THUMPD2Q9BTF0 503 aaKnown RBP18.06■□□□□ 0.48
KDM3A-201ENST00000312912 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 CBFA2T2O43439 604 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 DCTN1Q14203 1278 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
KDM3A-201ENST00000312912 PPFIBP1Q86W92 1011 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 PLCD3Q8N3E9 789 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 PEG3Q9GZU2 1588 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 TBC1D2Q9BYX2 928 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 BRPF1P55201 1214 aaPredicted RBP18.05■□□□□ 0.48
KDM3A-201ENST00000312912 PPP4R3BQ5MIZ7 849 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 MPNDQ8N594 471 aa18.05■□□□□ 0.48
KDM3A-201ENST00000312912 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 KIAA0754O94854 1291 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 MAP3K11Q16584 847 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 CDK5RAP3Q96JB5 506 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 TRERF1Q96PN7 1200 aa18.04■□□□□ 0.48
KDM3A-201ENST00000312912 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
KDM3A-201ENST00000312912 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
KDM3A-201ENST00000312912 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
KDM3A-201ENST00000312912 MTMR7Q9Y216 660 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 PCF11O94913 1555 aaKnown RBP18.03■□□□□ 0.48
KDM3A-201ENST00000312912 CUL7Q14999 1698 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 FAM177BA6PVY3 158 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 GTF2A1P52655 376 aaPredicted RBP18.03■□□□□ 0.48
KDM3A-201ENST00000312912 STIM1Q13586 685 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 MYO6Q9UM54 1294 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 SYCE3A1L190 88 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 MYL6BP14649 208 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 MCM5P33992 734 aa18.03■□□□□ 0.48
KDM3A-201ENST00000312912 DENND4BO75064 1496 aaPredicted RBP18.02■□□□□ 0.48
KDM3A-201ENST00000312912 CCAR1Q8IX12 1150 aaKnown RBP18.02■□□□□ 0.48
KDM3A-201ENST00000312912 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
KDM3A-201ENST00000312912 CCDC69A6NI79 296 aa18.02■□□□□ 0.48
KDM3A-201ENST00000312912 CASTP20810 708 aaKnown RBP18.02■□□□□ 0.48
KDM3A-201ENST00000312912 PTPN23Q9H3S7 1636 aa18.02■□□□□ 0.48
KDM3A-201ENST00000312912 ADGRL1O94910 1474 aa18.02■□□□□ 0.47
KDM3A-201ENST00000312912 NUTM2BA6NNL0 878 aaPredicted RBP18.02■□□□□ 0.47
KDM3A-201ENST00000312912 NUTM2EB1AL46 878 aaPredicted RBP18.02■□□□□ 0.47
KDM3A-201ENST00000312912 NUTM2AQ8IVF1 878 aaPredicted RBP18.02■□□□□ 0.47
KDM3A-201ENST00000312912 SCAND2PQ9GZW5 306 aaPredicted RBP18.02■□□□□ 0.47
KDM3A-201ENST00000312912 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms