RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 PIBF1Q8WXW3 757 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.03□□□□□ -0.32
CHFR-201ENST00000266880 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 ZSCAN12O43309 604 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 DIAPH1O60610 1272 aaKnown RBP13.03□□□□□ -0.32
CHFR-201ENST00000266880 HSPA4P34932 840 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
CHFR-201ENST00000266880 RB1CC1Q8TDY2 1594 aa13.02□□□□□ -0.32
CHFR-201ENST00000266880 HLTFQ14527 1009 aaKnown RBP eCLIP13.02□□□□□ -0.32
CHFR-201ENST00000266880 HIP1O00291 1037 aa13.02□□□□□ -0.32
CHFR-201ENST00000266880 APBB1IPQ7Z5R6 666 aaPredicted RBP13.02□□□□□ -0.32
CHFR-201ENST00000266880 CEP112Q8N8E3 955 aa13.02□□□□□ -0.32
CHFR-201ENST00000266880 CCDC6Q16204 474 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 SCLT1Q96NL6 688 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 TTC31Q49AM3 519 aaPredicted RBP13.02□□□□□ -0.33
CHFR-201ENST00000266880 C6orf163Q5TEZ5 329 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 CCDC69A6NI79 296 aa13.02□□□□□ -0.33
CHFR-201ENST00000266880 SURF6O75683 361 aaKnown RBP13.02□□□□□ -0.33
CHFR-201ENST00000266880 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 DESP17661 470 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 CEP57Q86XR8 500 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 ZNF428Q96B54 188 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 PIK3R5Q8WYR1 880 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 MINK1Q8N4C8 1332 aaPredicted RBP13.01□□□□□ -0.33
CHFR-201ENST00000266880 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
CHFR-201ENST00000266880 AKNAQ7Z591 1439 aa13□□□□□ -0.33
CHFR-201ENST00000266880 FBF1Q8TES7 1133 aa13□□□□□ -0.33
CHFR-201ENST00000266880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
CHFR-201ENST00000266880 POTEB2H3BUK9 544 aa13□□□□□ -0.33
CHFR-201ENST00000266880 ANKRD1Q15327 319 aa13□□□□□ -0.33
CHFR-201ENST00000266880 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
CHFR-201ENST00000266880 NOL7Q9UMY1 257 aaKnown RBP13□□□□□ -0.33
CHFR-201ENST00000266880 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
CHFR-201ENST00000266880 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
CHFR-201ENST00000266880 PDRG1Q9NUG6 133 aa13□□□□□ -0.33
CHFR-201ENST00000266880 TOP1P11387 765 aaKnown RBP13□□□□□ -0.33
CHFR-201ENST00000266880 EID1Q9Y6B2 187 aa13□□□□□ -0.33
CHFR-201ENST00000266880 GTPBP4Q9BZE4 634 aaKnown RBP12.99□□□□□ -0.33
CHFR-201ENST00000266880 POTEJP0CG39 1038 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 KRT222Q8N1A0 295 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 GON4LQ3T8J9 2241 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 DYNC1I1O14576 645 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 GNAI1P63096 354 aa12.99□□□□□ -0.33
CHFR-201ENST00000266880 AEBP2Q6ZN18 517 aaPredicted RBP12.99□□□□□ -0.33
CHFR-201ENST00000266880 MXRA7P84157 204 aa12.98□□□□□ -0.33
CHFR-201ENST00000266880 GRIPAP1Q4V328 841 aa12.98□□□□□ -0.33
CHFR-201ENST00000266880 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
CHFR-201ENST00000266880 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
CHFR-201ENST00000266880 CETN2P41208 172 aa12.98□□□□□ -0.33
CHFR-201ENST00000266880 TTC16Q8NEE8 873 aa12.98□□□□□ -0.33
CHFR-201ENST00000266880 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
CHFR-201ENST00000266880 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 ZWINTO95229 277 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 LARP1Q6PKG0 1096 aaKnown RBP12.97□□□□□ -0.33
CHFR-201ENST00000266880 CEP135Q66GS9 1140 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 FSD2A1L4K1 749 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 NAA25Q14CX7 972 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 MIPOL1Q8TD10 442 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 PPM1FP49593 454 aaPredicted RBP12.97□□□□□ -0.33
CHFR-201ENST00000266880 MICALL1Q8N3F8 863 aa12.97□□□□□ -0.33
CHFR-201ENST00000266880 BMP2KQ9NSY1 1161 aaPredicted RBP12.97□□□□□ -0.33
CHFR-201ENST00000266880 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
CHFR-201ENST00000266880 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
CHFR-201ENST00000266880 FEZ1Q99689 392 aa12.96□□□□□ -0.33
CHFR-201ENST00000266880 NOB1Q9ULX3 412 aaKnown RBP12.96□□□□□ -0.33
CHFR-201ENST00000266880 HSF2BPO75031 334 aa12.96□□□□□ -0.33
CHFR-201ENST00000266880 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
CHFR-201ENST00000266880 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
CHFR-201ENST00000266880 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
CHFR-201ENST00000266880 SOGA1O94964 1423 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 SOGA3Q5TF21 947 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 TMC6Q7Z403 805 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 HOMER2Q9NSB8 354 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 ALS2CR12Q96Q35 445 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 TRHP20396 242 aaPredicted RBP12.96□□□□□ -0.34
CHFR-201ENST00000266880 PAFAH1B1P43034 410 aa12.96□□□□□ -0.34
CHFR-201ENST00000266880 NOL3O60936 208 aaKnown RBP12.95□□□□□ -0.34
CHFR-201ENST00000266880 FKBP15Q5T1M5 1219 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
CHFR-201ENST00000266880 CPLX3Q8WVH0 158 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 FERP16591 822 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 CCDC121Q6ZUS5 278 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
CHFR-201ENST00000266880 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 USP25Q9UHP3 1055 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 CDKL5O76039 1030 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 IVLP07476 585 aa12.95□□□□□ -0.34
CHFR-201ENST00000266880 PRPF4BQ13523 1007 aaKnown RBP12.95□□□□□ -0.34
CHFR-201ENST00000266880 SIL1Q9H173 461 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 ERCC6Q03468 1493 aa12.94□□□□□ -0.34
CHFR-201ENST00000266880 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms