RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 OR6C3Q9NZP0 311 aa5.07□□□□□ -1.6
LINC00397-202ENST00000606785 SRPRBQ9Y5M8 271 aaKnown RBP5.07□□□□□ -1.6
LINC00397-202ENST00000606785 SQORQ9Y6N5 450 aa5.07□□□□□ -1.6
LINC00397-202ENST00000606785 COL11A2P13942 1736 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 SMIM35A0A1B0GVV1 85 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ANXA2P2A6NMY6 339 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 KDM4EB2RXH2 506 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 CYR61O00622 381 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PPP6CO00743 305 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 LDB2O43679 373 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PLPP2O43688 288 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 FMO6PO60774 539 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 KCNK5O95279 499 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 GNLYP22749 145 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 TCEA1P23193 301 aaKnown RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 NMBRP28336 390 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 HNRNPH1P31943 449 aaKnown RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 HSPA4P34932 840 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 RASSF2P50749 326 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ELLP55199 621 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 CSNK2A1P68400 391 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 MAD2L1Q13257 205 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PTK6Q13882 451 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 NFE2L1Q14494 772 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PTPRCAPQ14761 206 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 MVPQ14764 893 aaKnown RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 DAZAP2Q15038 168 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ZNF674Q2M3X9 581 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 CCDC92Q53HC0 331 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 DCST1Q5T197 706 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 FRG2Q64ET8 278 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 LCN10Q6JVE6 187 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 IYDQ6PHW0 289 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 B3GNT6Q6ZMB0 384 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PPP1R21Q6ZMI0 780 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 MSANTD1Q6ZTZ1 278 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 MON1BQ7L1V2 547 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 MFN1Q8IWA4 741 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ZNF595Q8IYB9 648 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 DSELQ8IZU8 1212 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 RASGEF1CQ8N431 466 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 BOLLQ8N9W6 283 aaKnown RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 CSNK2A3Q8NEV1 391 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 GRK7Q8WTQ7 553 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 NXNL1Q96CM4 212 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ERO1AQ96HE7 468 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 GRAMD2BQ96HH9 432 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 SMC6Q96SB8 1091 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 EGFL8Q99944 293 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 TMEM79Q9BSE2 394 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 RAD21L1Q9H4I0 556 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 SEBOXQ9HB31 216 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 PCDHA12Q9UN75 941 aa5.06□□□□□ -1.6
LINC00397-202ENST00000606785 TMEM184BQ9Y519 407 aaPredicted RBP5.06□□□□□ -1.6
LINC00397-202ENST00000606785 ARHGEF17Q96PE2 2063 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 A0A0B4J293 547 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 NDUFS4O43181 175 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 SLPIP03973 132 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 CASTP20810 708 aaKnown RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 HOXD9P28356 352 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 MPGP29372 298 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 HNF4AP41235 474 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 P2RX3P56373 397 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 YWHAHQ04917 246 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 RBPJQ06330 500 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 SMN1Q16637 294 aaKnown RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 TYSND1Q2T9J0 566 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 ZNF284Q2VY69 593 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 ZRANB3Q5FWF4 1079 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PPP6R3Q5H9R7 873 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PLA2G4FQ68DD2 849 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PCSK4Q6UW60 755 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PARM1Q6UWI2 310 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 RAPH1Q70E73 1250 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 SPATA19Q7Z5L4 167 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 SIX6OS1Q8N1H7 587 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 BEST3Q8N1M1 668 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 ARL10Q8N8L6 244 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PTP4A1Q93096 173 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 ZNF558Q96NG5 402 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 MS4A10Q96PG2 267 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 CRAMP1Q96RY5 1269 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 SEMA4CQ9C0C4 833 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 EQTNQ9NQ60 294 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 CNGB3Q9NQW8 809 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 PRMT7Q9NVM4 692 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 COQ3Q9NZJ6 369 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 CDC14AQ9UNH5 594 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 COG5Q9UP83 839 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.05□□□□□ -1.6
LINC00397-202ENST00000606785 HS3ST3A1Q9Y663 406 aa5.05□□□□□ -1.6
LINC00397-202ENST00000606785 A0A087WV48 116 aa5.04□□□□□ -1.6
LINC00397-202ENST00000606785 A0A1W2PPM1 405 aa5.04□□□□□ -1.6
LINC00397-202ENST00000606785 A4D1N5 150 aa5.04□□□□□ -1.6
LINC00397-202ENST00000606785 HTR3EA5X5Y0 456 aa5.04□□□□□ -1.6
LINC00397-202ENST00000606785 ENO4A6NNW6 628 aa5.04□□□□□ -1.6
LINC00397-202ENST00000606785 DNM1LO00429 736 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms