RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 A0A0J9YYE9 177 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 ZNF189O75820 626 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 TRBC1P01850 177 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 HLA-DQB2P05538 268 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 RAB15P59190 212 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 CCZ1BP86790 482 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 XRCC4Q13426 336 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 BORAQ6PGQ7 559 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 NRSN1Q8IZ57 195 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 SFRP1Q8N474 314 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 IL22RA1Q8N6P7 574 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 BMPERQ8N8U9 685 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 LRRN4Q8WUT4 740 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 SCAMP4Q969E2 229 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC39A1Q9NY26 324 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 TMEM9Q9P0T7 183 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 SAE1Q9UBE0 346 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 CD84Q9UIB8 345 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 DNPEPQ9ULA0 475 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 TMEM98Q9Y2Y6 226 aa17.39■□□□□ 0.37
SHKBP1-203ENST00000594298 A0A0U1RQJ8 604 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 A0A0U1RQS6 177 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 FTCDO95954 541 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 PYGMP11217 842 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 LIFP15018 202 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 PECAM1P16284 738 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 MPSTP25325 297 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 STC1P52823 247 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 EPHB1P54762 984 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 RPL26P61254 145 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 DSC2Q02487 901 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 PRKD1Q15139 912 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 TEX44Q53QW1 395 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 DCAF12Q5T6F0 453 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 GALNT13Q8IUC8 556 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 OR10G6Q8NH81 332 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 ARRDC2Q8TBH0 407 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC37A2Q8TED4 501 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 HES6Q96HZ4 224 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 TEFMQ96QE5 360 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 VAT1Q99536 393 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC38A3Q99624 504 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 OCIAD1Q9NX40 245 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 VPS18Q9P253 973 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 TUBD1Q9UJT1 453 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 RPL26L1Q9UNX3 145 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 CAPN6Q9Y6Q1 641 aa17.38■□□□□ 0.37
SHKBP1-203ENST00000594298 CYSRT1A8MQ03 144 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 CAPN5O15484 640 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 DUX1O43812 170 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ZBTB17Q13105 803 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 WDR74Q6RFH5 385 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 TRIM74Q86UV6 250 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ZC3H18Q86VM9 953 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 CACNA2D3Q8IZS8 1091 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 CNTD1Q8N815 330 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 TTC13Q8NBP0 860 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ALG3Q92685 438 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 HAUS1Q96CS2 278 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 AHCYL2Q96HN2 611 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 AGAP3Q96P47 875 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 CATSPER2Q96P56 530 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 SMIM14Q96QK8 99 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 LYSMD1Q96S90 227 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 AGAP2Q99490 1192 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 TDRD1Q9BXT4 1180 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 SPRY4Q9C004 299 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC25A51Q9H1U9 297 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 SARS2Q9NP81 518 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 LZTFL1Q9NQ48 299 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 BSNQ9UPA5 3926 aa17.37■□□□□ 0.37
SHKBP1-203ENST00000594298 ARHGEF17Q96PE2 2063 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 EFCAB7A8K855 629 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 H7C0C1 242 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 DDX3YO15523 660 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 RAD1O60671 282 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 DNAJC6O75061 913 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 CD86P42081 329 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 ATP5OP48047 213 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 NIPAL4Q0D2K0 466 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 IHHQ14623 411 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 ANKS6Q68DC2 871 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 ARHGAP22Q7Z5H3 698 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 FAM129CQ86XR2 697 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 CDKL3Q8IVW4 592 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 TEKT5Q96M29 485 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 QKIQ96PU8 341 aaKnown RBP eCLIP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 RIOK2Q9BVS4 552 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 ADGRE3Q9BY15 652 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 PCDH9Q9HC56 1237 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 PILRAQ9UKJ1 303 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms