RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 BHLHA9Q7RTU4 235 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HMGCLL1Q8TB92 370 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 KCNN1Q92952 543 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HAPLN3Q96S86 360 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 ZBED2Q9BTP6 218 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 NAA50Q9GZZ1 169 aaKnown RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 NDUFA13Q9P0J0 144 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 VILLO15195 856 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HS6ST1O60243 411 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 H6PDO95479 791 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 IL7RP16871 459 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 GJA1P17302 382 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HCAR3P49019 387 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 AIF1P55008 147 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HSPA14Q0VDF9 509 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 NFE2Q16621 373 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 TRIM16LQ309B1 348 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 TMTC4Q5T4D3 741 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 CAMK1DQ8IU85 385 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 TRPV1Q8NER1 839 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 TRIB2Q92519 343 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 ANAPC2Q9UJX6 822 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 RAI2Q9Y5P3 530 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 K7ERQ8 282 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 RPP40O75818 363 aaKnown RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 ZNF37AP17032 561 aaPredicted RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 MAGP20916 626 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 AQP1P29972 269 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 BOP1Q14137 746 aaKnown RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 GLYATQ6IB77 296 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 RNF19BQ6ZMZ0 732 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 HEATR4Q86WZ0 1026 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 OR10A6Q8NH74 314 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 MYLIPQ8WY64 445 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 IMP4Q96G21 291 aaKnown RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 GLT1D1Q96MS3 346 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 FBXO44Q9H4M3 255 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 SMURF2Q9HAU4 748 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
NDEL1-204ENST00000578172 AGO1Q9UL18 857 aaKnown RBP13.55□□□□□ -0.24
NDEL1-204ENST00000578172 A0A0U1RQF3 1178 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ACOT8O14734 319 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 SLC22A3O75751 556 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CD1DP15813 335 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 RHOQP17081 205 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 IL2P60568 153 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 BNIP3Q12983 259 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CARTPTQ16568 116 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 PATL1Q86TB9 770 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CPSF7Q8N684 471 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ZFYVE28Q9HCC9 887 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 TREX1Q9NSU2 369 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 RBM47A0AV96 593 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ALDH2P05091 517 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 MBL2P11226 248 aaPredicted RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 SLC5A2P31639 672 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 NEK2P51955 445 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 OCA2Q04671 838 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CDH18Q13634 790 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 KDELC1Q6UW63 502 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ITFG1Q8TB96 612 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 TRIM62Q9BVG3 475 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ASB8Q9H765 288 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CD84Q9UIB8 345 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ARVCFO00192 962 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 PRRG1O14668 218 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CYBBP04839 570 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 HSPA1AP0DMV8 641 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 HSPA1BP0DMV9 641 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 DGKEP52429 567 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 OR4D2P58180 307 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 VAC14Q08AM6 782 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 LSAMPQ13449 338 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 LRP8Q14114 963 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 RAB41Q5JT25 222 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 OGFOD2Q6N063 350 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 GPRIN3Q6ZVF9 776 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 DBF4BQ8NFT6 615 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 DDI1Q8WTU0 396 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ITFG2Q969R8 447 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 SCLYQ96I15 445 aa13.54□□□□□ -0.24
NDEL1-204ENST00000578172 ZFRQ96KR1 1074 aaKnown RBP13.54□□□□□ -0.24
NDEL1-204ENST00000578172 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms