RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TMC3Q7Z5M5 1100 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 PIP4P1Q86T03 277 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 TRIM74Q86UV6 250 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 ACTRT1Q8TDG2 376 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 SAP25Q8TEE9 199 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 OR1E3Q8WZA6 343 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 PDXPQ96GD0 296 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 CAPZA3Q96KX2 299 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 APOOQ9BUR5 198 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 RIOK2Q9BVS4 552 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 ADGRE3Q9BY15 652 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 ZDHHC5Q9C0B5 715 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 FGF22Q9HCT0 170 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 BPIFA1Q9NP55 256 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 MRPL40Q9NQ50 206 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 TM7SF3Q9NS93 570 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 KCNK4Q9NYG8 393 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 CNOT6Q9ULM6 557 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 TPX2Q9ULW0 747 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 ST14Q9Y5Y6 855 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 ARL5AQ9Y689 179 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 OAS3Q9Y6K5 1087 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 TRPM6Q9BX84 2022 aa9.42□□□□□ -0.9
NPLOC4-219ENST00000576713 LRP4O75096 1905 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TCRBV7S3A2A0A539 114 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 PSMD11O00231 422 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ADAM11O75078 769 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 CBFA2T3O75081 653 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ANXA9O76027 345 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 AP2A1O95782 977 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 EPOP01588 193 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 MYF5P13349 255 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ZNF30P17039 623 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 BPIP17213 487 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TPH1P17752 444 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 CA4P22748 312 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 EPHA8P29322 1005 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 COILP38432 576 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 RABIFP47224 123 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ATXN3P54252 364 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TERF1P54274 439 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 GEMP55040 296 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 MTM1Q13496 603 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ALG11Q2TAA5 492 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 P3H1Q32P28 736 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ZNF648Q5T619 568 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ALS2CLQ60I27 953 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 SYT10Q6XYQ8 523 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ZSCAN30Q86W11 494 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 HEATR4Q86WZ0 1026 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 PNPLA1Q8N8W4 532 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 DEFB124Q8NES8 71 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 BLOC1S5Q8TDH9 187 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TSACCQ96A04 125 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 NAPGQ99747 312 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TBL1YQ9BQ87 522 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TRIM56Q9BRZ2 755 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 TEX101Q9BY14 249 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 FRMD8P1Q9BZ68 369 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 NRSN2Q9GZP1 204 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ERVMER34-1Q9H9K5 563 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 MAGEE1Q9HCI5 957 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 ARFGAP3Q9NP61 516 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 HAUS2Q9NVX0 235 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 DRG1Q9Y295 367 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 PI4KAP42356 2102 aa9.41□□□□□ -0.9
NPLOC4-219ENST00000576713 CCL22O00626 93 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CES2O00748 559 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CASC3O15234 703 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 INPP4BO15327 924 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 STK10O94804 968 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CER1O95813 267 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 FGF1P05230 155 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CEACAM5P06731 702 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 NME1P15531 152 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 HLA-DPA1P20036 260 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 DGKAP23743 735 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 STIP1P31948 543 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 RXRGP48443 463 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 VPS41P49754 854 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CDK3Q00526 305 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 DPTQ07507 201 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 OVGP1Q12889 678 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 C1orf61Q13536 156 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 SEMA5AQ13591 1074 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 NFATC4Q14934 902 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 KHDC1Q4VXA5 237 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 HENMT1Q5T8I9 393 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 ANKRD22Q5VYY1 191 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 IL27RAQ6UWB1 636 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 MACC1Q6ZN28 852 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 ZNF534Q76KX8 674 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 PARGQ86W56 976 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms