RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 EML2O95834 649 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 RPLP0P05388 317 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 GPR89BP0CG08 455 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 GLB1P16278 677 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 MSNP26038 577 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 CA5AP35218 305 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 KCNJ1P48048 391 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 PDE1BQ01064 536 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 MSLNQ13421 630 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 SPIDRQ14159 915 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 KCTD19Q17RG1 926 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 INSCQ1MX18 579 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 GPRC6AQ5T6X5 926 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 DRICH1Q6PGQ1 229 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 PPP1R21Q6ZMI0 780 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 RBM44Q6ZP01 1051 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 LINC00523Q86TU6 105 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 LRRTM4Q86VH4 590 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TRAPPC5Q8IUR0 188 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 CCNJLQ8IV13 435 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 NAGSQ8N159 534 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 PRELID2Q8N945 189 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 DNAAF3Q8N9W5 541 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 DDHD1Q8NEL9 900 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 OR6C4Q8NGE1 309 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 OR52K1Q8NGK4 314 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 MDM1Q8TC05 714 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 NXPE2Q96DL1 559 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 DNAJC1Q96KC8 554 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TTC25Q96NG3 672 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 ZCCHC2Q9C0B9 1178 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 SMOXQ9NWM0 555 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 SMARCAL1Q9NZC9 954 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 LRIT1Q9P2V4 623 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
RAB5C-204ENST00000547517 TPRP12270 2363 aaKnown RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 COL27A1Q8IZC6 1860 aaPredicted RBP11.68□□□□□ -0.54
RAB5C-204ENST00000547517 ERI2A8K979 691 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 D6RAR5 112 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 CHUKO15111 745 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 LDB2O43679 373 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 NUDT21O43809 227 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 APRTP07741 180 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 AKT1P31749 480 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 RPL22P35268 128 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 PDX1P52945 283 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 CCL7P80098 99 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 BASP1P80723 227 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 TMEM115Q12893 351 aaPredicted RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 NFATC2Q13469 925 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 SEMA5AQ13591 1074 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 ISXQ2M1V0 245 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 LDLRAP1Q5SW96 308 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 MICALCLQ6ZW33 695 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 SPRED1Q7Z699 444 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF547Q8IVP9 402 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 RASGEF1CQ8N431 466 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 ARL14Q8N4G2 192 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 WDR48Q8TAF3 677 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF398Q8TD17 642 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 SLC37A2Q8TED4 501 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 COG1Q8WTW3 980 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 PBKQ96KB5 322 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 GFM1Q96RP9 751 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 OSBPL9Q96SU4 736 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 AP1M1Q9BXS5 423 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 CCDC86Q9H6F5 360 aaKnown RBP11.67□□□□□ -0.54
RAB5C-204ENST00000547517 ASB8Q9H765 288 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 KLC4Q9NSK0 619 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 CRLS1Q9UJA2 301 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 APPL1Q9UKG1 709 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 DNAJC16Q9Y2G8 782 aa11.67□□□□□ -0.54
RAB5C-204ENST00000547517 IGF2RP11717 2491 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ASXL3Q9C0F0 2248 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 A0A1W2PQM1 296 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 PGRMC1O00264 195 aaKnown RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 NTN3O00634 580 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 KMOO15229 486 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 TCEA3O75764 348 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 SUN1O94901 812 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 GAS8O95995 478 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ZNF7P17097 686 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 MSH3P20585 1137 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 ITGALP20701 1170 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 PBLDP30039 288 aaPredicted RBP11.66□□□□□ -0.54
RAB5C-204ENST00000547517 MC4RP32245 332 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 HADHAP40939 763 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 GRIA1P42261 906 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 VPS41P49754 854 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 CTSCP53634 463 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 XIAPP98170 497 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 CYP4F3Q08477 520 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 CDH17Q12864 832 aa11.66□□□□□ -0.54
RAB5C-204ENST00000547517 GSE1Q14687 1217 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms