RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SLC37A2Q8TED4 501 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 KIAA1143Q96AT1 154 aaPredicted RBP11.74□□□□□ -0.53
GABPB1-206ENST00000543881 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
GABPB1-206ENST00000543881 TADA1Q96BN2 335 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 IMP4Q96G21 291 aaKnown RBP11.74□□□□□ -0.53
GABPB1-206ENST00000543881 CCDC42Q96M95 316 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 AGAP3Q96P47 875 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 FAM83DQ9H4H8 585 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 HAUS2Q9NVX0 235 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 TMEM9Q9P0T7 183 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 ZNHIT2Q9UHR6 403 aa11.74□□□□□ -0.53
GABPB1-206ENST00000543881 MYO9AB2RTY4 2548 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 SPTBN1Q01082 2364 aaKnown RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 LOC101059948A0A1B0GTJ6 334 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 KRT1P04264 644 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 PIRTP0C851 137 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 MAP4P27816 1152 aaKnown RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 OAS2P29728 719 aaKnown RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 NOP2P46087 812 aaKnown RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 FASLGP48023 281 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 RAB15P59190 212 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 DYNLT1P63172 113 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 KLRB1Q12918 225 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 TBX2Q13207 712 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 SQSTM1Q13501 440 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 LRP8Q14114 963 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 SEPT6Q14141 434 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 ZNF648Q5T619 568 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 LRRC38Q5VT99 294 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 MFSD7Q6UXD7 560 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 CHST15Q7LFX5 561 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 ZNF761Q86XN6 746 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 RFX6Q8HWS3 928 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 RHOT2Q8IXI1 618 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 UNC5BQ8IZJ1 945 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 GPR26Q8NDV2 337 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 DPYSL5Q9BPU6 564 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 EFHD1Q9BUP0 239 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 TSPY26PQ9H489 355 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 ARFGAP3Q9NP61 516 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 VPS18Q9P253 973 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
GABPB1-206ENST00000543881 TBC1D29Q9UFV1 150 aa11.73□□□□□ -0.53
GABPB1-206ENST00000543881 A6NCN8 305 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TNNT1P13805 278 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 COMTP21964 271 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 PEX6Q13608 980 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 PDK1Q15118 436 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TCEAL1Q15170 157 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TAZQ16635 292 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 BMPERQ8N8U9 685 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 STARD8Q92502 1023 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 RTP4Q96DX8 246 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TEFMQ96QE5 360 aaKnown RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 ADGRE3Q9BY15 652 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 SPRY4Q9C004 299 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 SLC25A51Q9H1U9 297 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 KCNK4Q9NYG8 393 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 PKD2L2Q9NZM6 624 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 ATXN10Q9UBB4 475 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 SAE1Q9UBE0 346 aaPredicted RBP11.72□□□□□ -0.53
GABPB1-206ENST00000543881 SHOC2Q9UQ13 582 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 KCNK6Q9Y257 313 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 TP53TG5Q9Y2B4 290 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
GABPB1-206ENST00000543881 RGSL1A5PLK6 1076 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 MT-CYBP00156 380 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-206ENST00000543881 TPM1P09493 284 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ACP5P13686 325 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 PECAM1P16284 738 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ZNF8P17098 575 aaPredicted RBP11.71□□□□□ -0.53
GABPB1-206ENST00000543881 NR1D1P20393 614 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 CDKN2BP42772 138 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 MLLT10P55197 1068 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 MC1RQ01726 317 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ADCY2Q08462 1091 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 LLGL1Q15334 1064 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 PCSK7Q16549 785 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ALS2CLQ60I27 953 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 C16orf46Q6P387 395 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 TMEM71Q6P5X7 295 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 TIPARPQ7Z3E1 657 aaKnown RBP11.71□□□□□ -0.53
GABPB1-206ENST00000543881 TMC3Q7Z5M5 1100 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 NT5DC3Q86UY8 548 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 RHOT1Q8IXI2 618 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 CTRCQ99895 268 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ZMYND15Q9H091 742 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 GOLPH3Q9H4A6 298 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 ZFYVE1Q9HBF4 777 aa11.71□□□□□ -0.53
GABPB1-206ENST00000543881 SPO11Q9Y5K1 396 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms