RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 STMN3Q9NZ72 180 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 HACD3Q9P035 362 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC39A10Q9ULF5 831 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC12A4Q9UP95 1085 aa4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 SIRT4Q9Y6E7 314 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 PHRF1Q9P1Y6 1649 aaKnown RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 KDM6AO15550 1401 aaPredicted RBP4.7□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRAV6A0A075B6T7 132 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 A0A087WZ62 844 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SH3PXD2BA1X283 911 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 KRTAP29-1A8MX34 341 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 MIF4GDA9UHW6 222 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 E9PBE3 544 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PFDN6O15212 129 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC22A1O15245 554 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 FFAR2O15552 330 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPIP5K2O43314 1243 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CA12O43570 354 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZBTB14O43829 449 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ACSL4O60488 711 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX10O60499 249 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PLA2G6O60733 806 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATP9AO75110 1047 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 GPC4O75487 556 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 EPN2O95208 641 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 GNA14O95837 355 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPS17P08708 135 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PABPC4LP0CB38 370 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 MUTP22033 750 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 MPGP29372 298 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 AXLP30530 894 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CASP14P31944 242 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 KRT2P35908 639 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 NUDT1P36639 197 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPARGP37231 505 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PBX1P40424 430 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 GSSP48637 474 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 LIMK1P53667 647 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RPS13P62277 151 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZBTB16Q05516 673 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SMARCB1Q12824 385 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CYTH1Q15438 398 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 OASLQ15646 514 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RAB30Q15771 203 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 LIN52Q52LA3 116 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TDRD12Q587J7 1177 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 IGSF11Q5DX21 431 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM196Q5HYL7 178 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PAPD7Q5XG87 772 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RAP1GAP2Q684P5 730 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SNRNP48Q6IEG0 339 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 DUS1LQ6P1R4 473 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRIM65Q6PJ69 517 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 B3GNT6Q6ZMB0 384 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 C12orf56Q8IXR9 622 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZBED8Q8IZ13 594 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 NKAIN3Q8N8D7 197 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC197Q8NCU1 140 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SRFBP1Q8NEF9 429 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 LILRB4Q8NHJ6 448 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF398Q8TD17 642 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 NOC3LQ8WTT2 800 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RBM18Q96H35 190 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 METTL2AQ96IZ6 378 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CFAP57Q96MR6 1250 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TSNARE1Q96NA8 513 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SERINC2Q96SA4 455 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SEC62Q99442 399 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 OLFM1Q99784 485 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CTRCQ99895 268 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SYT15Q9BQS2 421 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 RAD21L1Q9H4I0 556 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ERVK-5Q9HDB9 667 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CD209Q9NNX6 404 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 SDHAF3Q9NRP4 125 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TAS2R7Q9NYW3 318 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 C9orf78Q9NZ63 289 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ASIC3Q9UHC3 531 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 IPO11Q9UI26 975 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 LAMP5Q9UJQ1 280 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 DUSP12Q9UNI6 340 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 DNAJC16Q9Y2G8 782 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 CAB39Q9Y376 341 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 DTNAQ9Y4J8 743 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 PCDHB7Q9Y5E2 793 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 HEY1Q9Y5J3 304 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 HEMK1Q9Y5R4 338 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 USP16Q9Y5T5 823 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ALS2Q96Q42 1657 aa4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 MAP2P11137 1827 aaKnown RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRPM3Q9HCF6 1732 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P13-201ENST00000511263 ABCC12Q96J65 1359 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PIK3C2AO00443 1686 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 GMNCA6NCL1 334 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PLOD2O00469 737 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 IFIT3O14879 490 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms