RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 KLC4Q9NSK0 619 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 FAM49BQ9NUQ9 324 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 INTS9Q9NV88 658 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TMEM51Q9NW97 253 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 DNAJC28Q9NX36 388 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 RRN3Q9NYV6 651 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 RSPH14Q9UHP6 348 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 XPO7Q9UIA9 1087 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 CDH9Q9ULB4 789 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 NAALADL1Q9UQQ1 740 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 PCDHGA2Q9Y5H1 932 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 RAD54BQ9Y620 910 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 GBF1Q92538 1859 aa4.47□□□□□ -1.69
UBE2D3-230ENST00000510599 TTC3P53804 2025 aa4.46□□□□□ -1.69
UBE2D3-230ENST00000510599 MICAL3Q7RTP6 2002 aa4.46□□□□□ -1.69
UBE2D3-230ENST00000510599 OBSL1O75147 1896 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 A0A0U1RQF3 1178 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 EXOC1LA0A1B0GW35 172 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 WDR27A2RRH5 827 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ARL5CA6NH57 179 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 H7C0C1 242 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 M0QZQ0 153 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TRDMT1O14717 391 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PRPF4O43172 522 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GCATO75600 419 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GRAP2O75791 330 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 FAM155BO75949 473 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 AGFG2O95081 481 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 IFNB1P01574 187 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ASGR1P07306 291 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CCDC130P13994 396 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 BRAFP15056 766 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TPSB2P20231 275 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 DRD4P21917 467 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CYP2F1P24903 491 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GCAP28676 217 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ADORA2BP29275 332 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 EPHB2P29323 1055 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ATP5OP48047 213 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 HCAR3P49019 387 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GEMIN4P57678 1058 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 YWHAZP63104 245 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 DYNLT1P63172 113 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 MRPS5P82675 430 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TFF2Q03403 129 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 RNASELQ05823 741 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 FAPQ12884 760 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PDIA2Q13087 525 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 KLF9Q13886 244 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ITIH4Q14624 930 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 KCNJ11Q14654 390 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 HLXQ14774 488 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TPSAB1Q15661 275 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ETFDHQ16134 617 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 UPP1Q16831 310 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CDO1Q16878 200 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 KCTD19Q17RG1 926 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CCDC38Q502W7 563 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 SLC45A4Q5BKX6 768 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 RAB41Q5JT25 222 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 UBAP2Q5T6F2 1119 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GKAP1Q5VSY0 366 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 MORN5Q5VZ52 161 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CCSAPQ6IQ19 270 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 SCYL2Q6P3W7 929 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 FAM171BQ6P995 826 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 VSTM1Q6UX27 236 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CXCL17Q6UXB2 119 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 DSTYKQ6XUX3 929 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CLEC20AQ6ZU45 233 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PAQR9Q6ZVX9 377 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PIGWQ7Z7B1 504 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CPLX4Q7Z7G2 160 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 RNF180Q86T96 592 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PRUNE1Q86TP1 453 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TRABD2AQ86V40 505 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PIGZQ86VD9 579 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ZBED8Q8IZ13 594 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 DEFB106AQ8N104 65 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PDIK1LQ8N165 341 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PQLC3Q8N755 202 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ATP11CQ8NB49 1132 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 MCUQ8NE86 351 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PYROXD1Q8WU10 500 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 CKAP2Q8WWK9 683 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 IRGQQ8WZA9 623 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 NTAN1Q96AB6 310 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 GRAMD1AQ96CP6 724 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 LRRC39Q96DD0 335 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 PIWIL1Q96J94 861 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 SENP8Q96LD8 212 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ZNF48Q96MX3 618 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 NPY6RQ99463 290 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 SELENOSQ9BQE4 189 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 ACBD6Q9BR61 282 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 TRIM62Q9BVG3 475 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 B3GNT5Q9BYG0 378 aa4.46□□□□□ -1.7
UBE2D3-230ENST00000510599 SEZ6LQ9BYH1 1024 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms