RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TINAGQ9UJW2 476 aa5.39□□□□□ -1.55
SSR3-208ENST00000496050 FBXL2Q9UKC9 423 aa5.39□□□□□ -1.55
SSR3-208ENST00000496050 A0A0U1RQJ8 604 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 A8MXE2 369 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 MAGEB17A8MXT2 336 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 NDUFS4O43181 175 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 PSMD10O75832 226 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 ZWINTO95229 277 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 VPREB1P12018 145 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 NR2F2P24468 414 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 PPP5CP53041 499 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 TAS2R38P59533 333 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 PDE1BQ01064 536 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 SNAPC1Q16533 368 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 SYT16Q17RD7 645 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 CBWD6Q4V339 395 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 CBWD3Q5JTY5 395 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 KCNT1Q5JUK3 1230 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 ZDHHC20Q5W0Z9 365 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 RGMBQ6NW40 437 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 WDR73Q6P4I2 378 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 PAPD4Q6PIY7 484 aaKnown RBP5.38□□□□□ -1.55
SSR3-208ENST00000496050 BRAT1Q6PJG6 821 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 DENND5BQ6ZUT9 1274 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 GPR180Q86V85 440 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 VSIG1Q86XK7 387 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 CHERPQ8IWX8 916 aaKnown RBP5.38□□□□□ -1.55
SSR3-208ENST00000496050 UTP15Q8TED0 518 aaKnown RBP5.38□□□□□ -1.55
SSR3-208ENST00000496050 LPGAT1Q92604 370 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 RHBDF1Q96CC6 855 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 MTBPQ96DY7 904 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 SMC6Q96SB8 1091 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 SLCO5A1Q9H2Y9 848 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 WDR35Q9P2L0 1181 aa5.38□□□□□ -1.55
SSR3-208ENST00000496050 DDX25Q9UHL0 483 aaKnown RBP5.38□□□□□ -1.55
SSR3-208ENST00000496050 FAM90A26D6RGX4 464 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 ANKRD28O15084 1053 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 ZBTB43O43298 467 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 PLPP2O43688 288 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 KCNJ13O60928 360 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 BCL10O95999 233 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 QDPRP09417 244 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 HRH2P25021 359 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 LMO1P25800 156 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 PEX5P50542 639 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 CCR3P51677 355 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 RAD23AP54725 363 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 SPOCK1Q08629 439 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 MVPQ14764 893 aaKnown RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 PLCB4Q15147 1175 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 ATP13A5Q4VNC0 1218 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 FAM98BQ52LJ0 330 aaKnown RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 ZNF425Q6IV72 752 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 FAM122CQ6P4D5 195 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 CCDC186Q7Z3E2 898 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 HAUS6Q7Z4H7 955 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 NRROSQ86YC3 692 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 CEP97Q8IW35 865 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 GCSAMQ8N6F7 178 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 SLC38A9Q8NBW4 561 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 THAP6Q8TBB0 222 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 FAM216AQ8WUB2 273 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 SPATA17Q96L03 361 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 MTERF1Q99551 399 aaKnown RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 CMKLR1Q99788 373 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 PPIL3Q9H2H8 161 aaKnown RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 MCM9Q9NXL9 1143 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 TAS2R14Q9NYV8 317 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 CRNNQ9UBG3 495 aaPredicted RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 OSGIN1Q9UJX0 560 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 KLHL20Q9Y2M5 609 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 WBP11Q9Y2W2 641 aaKnown RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 TMEM184BQ9Y519 407 aaPredicted RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
SSR3-208ENST00000496050 COL3A1P02461 1466 aaPredicted RBP5.37□□□□□ -1.55
SSR3-208ENST00000496050 TRBC2A0A5B9 178 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 SLC16A5O15375 505 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 ZNF217O75362 1048 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 PRSS2P07478 247 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 CCDC175P0C221 793 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 IGHV4-30-4P0DP06 118 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 SCP2P22307 547 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 CPT2P23786 658 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 PCYT1AP49585 367 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 ZNF81P51508 661 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 CSE1LP55060 971 aaKnown RBP5.36□□□□□ -1.55
SSR3-208ENST00000496050 ZNF628Q5EBL2 1059 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 FAM69BQ5VUD6 431 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 C8orf82Q6P1X6 216 aaPredicted RBP5.36□□□□□ -1.55
SSR3-208ENST00000496050 FJX1Q86VR8 437 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 OR10S1Q8NGN2 331 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 VPS33AQ96AX1 596 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 CFAP57Q96MR6 1250 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 QRFPRQ96P65 431 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 NEK1Q96PY6 1258 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 OR1F2PQ96R84 312 aa5.36□□□□□ -1.55
SSR3-208ENST00000496050 PIH1D3Q9NQM4 214 aaKnown RBP5.36□□□□□ -1.55
SSR3-208ENST00000496050 SH3GLB2Q9NR46 395 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms