RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 DNAAF3Q8N9W5 541 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 FAM181AQ8N9Y4 354 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 GPBAR1Q8TDU6 330 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 PATE1Q8WXA2 126 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 ZNF778Q96MU6 729 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 NAP1L3Q99457 506 aaPredicted RBP11.53□□□□□ -0.56
UBA3-211ENST00000493957 CDH19Q9H159 772 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 HOMER3Q9NSC5 361 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 GULP1Q9UBP9 304 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 SLC2A6Q9UGQ3 507 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 ZNHIT2Q9UHR6 403 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 FEZ2Q9UHY8 353 aaPredicted RBP11.53□□□□□ -0.56
UBA3-211ENST00000493957 KLK13Q9UKR3 277 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 GPR34Q9UPC5 381 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 DOLKQ9UPQ8 538 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 SAR1BQ9Y6B6 198 aa11.53□□□□□ -0.56
UBA3-211ENST00000493957 TPRP12270 2363 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 MROH6A6NGR9 719 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 OR51F1A6NGY5 319 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 C2orf81A6NN90 581 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 ERI2A8K979 691 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 NUAK1O60285 661 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 NOBOXO60393 691 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 SRP72O76094 671 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 TMEM63AO94886 807 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 PRAMEF1O95521 474 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 CRTAMO95727 393 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 EML2O95834 649 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 CKMT1AP12532 417 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 ACP5P13686 325 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 ACP1P24666 158 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 PTGIRP43119 386 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 CDH17Q12864 832 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 GPRC6AQ5T6X5 926 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 PDPK2PQ6A1A2 396 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 CHST15Q7LFX5 561 aaPredicted RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 RAB44Q7Z6P3 723 aaPredicted RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 LINC00523Q86TU6 105 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 GKN2Q86XP6 184 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 GALNT13Q8IUC8 556 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 PHYKPLQ8IUZ5 450 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 FAM46DQ8NEK8 389 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 CPT1BQ92523 772 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 VPS35Q96QK1 796 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 DUSP23Q9BVJ7 150 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 TRIM39Q9HCM9 518 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 EIF2B3Q9NR50 452 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 TRNAU1APQ9NX07 287 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 TAAR2Q9P1P5 351 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 VPS18Q9P253 973 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 SLC23A2Q9UGH3 650 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 APOBEC2Q9Y235 224 aaKnown RBP11.52□□□□□ -0.57
UBA3-211ENST00000493957 KCNK6Q9Y257 313 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 FRYQ5TBA9 3013 aa11.52□□□□□ -0.57
UBA3-211ENST00000493957 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 GOLGA6L10A0A0M3HER8 536 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 CPED1A4D0V7 1026 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 FAM149AA5PLN7 773 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 GRID2O43424 1007 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 RFPL3O75679 317 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 MC4RP32245 332 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 FNTAP49354 379 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 CTSCP53634 463 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 MAZP56270 477 aaKnown RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 SESN2P58004 480 aaPredicted RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 ETF1P62495 437 aaKnown RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 B4GALNT1Q00973 533 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 ILF3Q12906 894 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBA3-211ENST00000493957 NR0B2Q15466 257 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 EFL1Q7Z2Z2 1120 aaKnown RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 ZNF547Q8IVP9 402 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 KLHL7Q8IXQ5 586 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 ARL10Q8N8L6 244 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 RASGEF1AQ8N9B8 481 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 DDHD1Q8NEL9 900 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 OR13J1Q8NGT2 312 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 GDAP1Q8TB36 358 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 IFI44Q8TCB0 444 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 ZNF398Q8TD17 642 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 ADAMTS14Q8WXS8 1223 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 LRRC45Q96CN5 670 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 GSDMCQ9BYG8 508 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 DPEP2Q9H4A9 486 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 ASB8Q9H765 288 aa11.51□□□□□ -0.57
UBA3-211ENST00000493957 NLE1Q9NVX2 485 aaPredicted RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 MAP1BP46821 2468 aaKnown RBP11.51□□□□□ -0.57
UBA3-211ENST00000493957 CCDC162PA2VCL2 907 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 GOLGA8MH3BSY2 632 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 CHUKO15111 745 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 PPFIA2O75334 1257 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 AVILO75366 819 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 CDK14O94921 469 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 TPSB2P20231 275 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 MGAT1P26572 445 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 CASQ1P31415 396 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 ACTR1BP42025 376 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 MAGEA6P43360 314 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 ACTR1AP61163 376 aa11.5□□□□□ -0.57
UBA3-211ENST00000493957 MRPS25P82663 173 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms