RNA–Protein interactions for RNA: ENST00000482017.1

MCF2L2-211, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-211ENST00000482017 VPS35Q96QK1 796 aa18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 CATSPERZQ9NTU4 200 aa18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 MARCH4Q9P2E8 410 aaPredicted RBP18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 ATXN10Q9UBB4 475 aa18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 ZC3H7BQ9UGR2 993 aaKnown RBP18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 APOBEC3BQ9UH17 382 aaKnown RBP18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 SUFUQ9UMX1 484 aa18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 GPSM3Q9Y4H4 160 aa18.58■□□□□ 0.56
MCF2L2-211ENST00000482017 MAGEB16A2A368 324 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 BHMG1C9JSJ3 638 aaPredicted RBP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 H3BM21 787 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 TNFP01375 233 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 POLBP06746 335 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 ZNF8P17098 575 aaPredicted RBP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 MSH3P20585 1137 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 ARNTP27540 789 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 ARRB1P49407 418 aaPredicted RBP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 CCT8P50990 548 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 GTF2H3Q13889 308 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 SEMA3AQ14563 771 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 CRYMQ14894 314 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 DBN1Q16643 649 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 LDLRAP1Q5SW96 308 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 KIAA0930Q6ICG6 404 aaPredicted RBP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 UNC5BQ8IZJ1 945 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 NXPE1Q8N323 547 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 OXR1Q8N573 874 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 DDHD1Q8NEL9 900 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 LMX1AQ8TE12 382 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 TTC25Q96NG3 672 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 SLC13A1Q9BZW2 595 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 TMEM9BQ9NQ34 198 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 C20orf96Q9NUD7 363 aaPredicted RBP18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 ZDHHC18Q9NUE0 388 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 ZNHIT2Q9UHR6 403 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 TEX264Q9Y6I9 313 aa18.57■□□□□ 0.56
MCF2L2-211ENST00000482017 A0A1B0GTQ1 180 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 E7ESA3 106 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 USP1O94782 785 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 CDK14O94921 469 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 FUCA1P04066 466 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 CSF2P04141 144 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 CELA2BP08218 269 aaPredicted RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 CTSEP14091 401 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 NME1P15531 152 aaKnown RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 PSMA3P25788 255 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 ACRV1P26436 265 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 HK3P52790 923 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 THOC5Q13769 683 aaKnown RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 SHBQ15464 509 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 UNC5AQ6ZN44 842 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 ALYREFQ86V81 257 aaKnown RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 IFT20Q8IY31 132 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 GSPT2Q8IYD1 628 aaKnown RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 PYROXD1Q8WU10 500 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 PEX13Q92968 403 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 DCUN1D1Q96GG9 259 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 C19orf43Q9BQ61 176 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 BOCQ9BWV1 1114 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 TRIM39Q9HCM9 518 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 RRAGDQ9NQL2 400 aaPredicted RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 SMOXQ9NWM0 555 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 MTRF1LQ9UGC7 380 aaKnown RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 NFU1Q9UMS0 254 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 SLC17A4Q9Y2C5 497 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 PLEKHM1Q9Y4G2 1056 aa18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 PCYT1BQ9Y5K3 369 aaPredicted RBP18.56■□□□□ 0.56
MCF2L2-211ENST00000482017 GOLGA4Q13439 2230 aaKnown RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 ZCWPW2A0A1B0GU75 182 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 OR2AG2A6NM03 316 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 C4orf47A7E2U8 309 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 CD3EAPO15446 510 aaKnown RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 FFAR2O15552 330 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 PIAS2O75928 621 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 IVLP07476 585 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 EPHA8P29322 1005 aaPredicted RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 PBLDP30039 288 aaPredicted RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 HNRNPKP61978 463 aaKnown RBP eCLIP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 TMEM115Q12893 351 aaPredicted RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 LONRF1Q17RB8 773 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 GPR33Q49SQ1 333 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 PRRT3Q5FWE3 981 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 SPANXN3Q5MJ09 141 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 TMEM135Q86UB9 458 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 KCNMB4Q86W47 210 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 GALNT13Q8IUC8 556 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 TRAPPC5Q8IUR0 188 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 DTX3LQ8TDB6 740 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 LRRC39Q96DD0 335 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 C9orf72Q96LT7 481 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 OR2M4Q96R27 311 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 COPS8Q99627 209 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 LRRC61Q9BV99 259 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 ZCCHC2Q9C0B9 1178 aaKnown RBP18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 TMEM168Q9H0V1 697 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 ERVMER34-1Q9H9K5 563 aa18.55■□□□□ 0.56
MCF2L2-211ENST00000482017 TM7SF3Q9NS93 570 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms