RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SOWAHCQ53LP3 525 aaPredicted RBP7.9□□□□□ -1.15
TPM3-215ENST00000469717 SNAP47Q5SQN1 464 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 CYP2U1Q7Z449 544 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 FBXO16Q8IX29 292 aaPredicted RBP7.9□□□□□ -1.15
TPM3-215ENST00000469717 BEND7Q8N7W2 519 aaPredicted RBP7.9□□□□□ -1.15
TPM3-215ENST00000469717 OR13J1Q8NGT2 312 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 FBXO30Q8TB52 745 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 ROPN1LQ96C74 230 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 PPM1MQ96MI6 270 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 DACH2Q96NX9 599 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 NODALQ96S42 347 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 TRIM15Q9C019 465 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 R3HDMLQ9H3Y0 253 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 LRRC4Q9HBW1 653 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 FAM118AQ9NWS6 357 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 THG1LQ9NWX6 298 aaKnown RBP7.9□□□□□ -1.15
TPM3-215ENST00000469717 DKK3Q9UBP4 350 aa7.9□□□□□ -1.15
TPM3-215ENST00000469717 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 OR51F1A6NGY5 319 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ZBTB42B2RXF5 422 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 C19orf81C9J6K1 198 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CCRL2O00421 344 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 MITFO75030 526 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 BEST1O76090 585 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 C1RP00736 705 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLC4A1P02730 911 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PTPN2P17706 415 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 NOS2P35228 1153 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 EFNA5P52803 228 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLC12A2P55011 1212 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 UFM1P61960 85 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 INCA1Q0VD86 236 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ADIGQ0VDE8 80 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PRAMEF19Q5SWL8 479 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SPESP1Q6UW49 350 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ENPP6Q6UWR7 440 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 GALNT5Q7Z7M9 940 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 TMEM179BQ7Z7N9 219 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 GPRC5AQ8NFJ5 357 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CALML6Q8TD86 181 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ESAMQ96AP7 390 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CNDP2Q96KP4 475 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 GAD1Q99259 594 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 MYOCQ99972 504 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 NIFKQ9BYG3 293 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 MID1IP1Q9NPA3 183 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ADPRHL2Q9NX46 363 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLC1A7O00341 560 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 DCLK1O15075 740 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ASNA1O43681 348 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PMPCBO75439 489 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CDK14O94921 469 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 FADS2O95864 444 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 GPIP06744 558 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PRDX3P30048 256 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 CD6P30203 668 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 FMO4P31512 558 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 EIF2DP41214 584 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 MTHFRP42898 656 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ALDH3A2P51648 485 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 IL1RL1Q01638 556 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 TUBA3CQ13748 450 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 TMEM132DQ14C87 1099 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 VARS2Q5ST30 1063 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 MIER2Q8N344 545 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 DTWD1Q8N5C7 304 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 MINDY1Q8N5J2 469 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 TWIST2Q8WVJ9 160 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PTERQ96BW5 349 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 DSN1Q9H410 356 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 RNF167Q9H6Y7 350 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 HPS4Q9NQG7 708 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 GJD2Q9UKL4 321 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 ACKR2O00590 384 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 FARP2O94887 1054 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 DNTTP04053 509 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ATICP31939 592 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CYP2C18P33260 490 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 MASP1P48740 699 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 BNIP2Q12982 314 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 UNC50Q53HI1 259 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SPOUT1Q5T280 376 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 HACD2Q6Y1H2 254 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 CCDC103Q8IW40 242 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SYTL1Q8IYJ3 562 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 TBC1D21Q8IYX1 336 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 PNPT1Q8TCS8 783 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLC2A14Q8TDB8 520 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 UBE2FQ969M7 185 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 C18orf25Q96B23 403 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 PYCR2Q96C36 320 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLIRPQ9GZT3 109 aaKnown RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 C6orf62Q9GZU0 229 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 PLEKHA5Q9HAU0 1116 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 ZBTB20Q9HC78 741 aaPredicted RBP7.89□□□□□ -1.15
TPM3-215ENST00000469717 SLC52A3Q9NQ40 469 aa7.89□□□□□ -1.15
TPM3-215ENST00000469717 POLG2Q9UHN1 485 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms