RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 BZW1Q7L1Q6 419 aaKnown RBP20.78■□□□□ 0.92
VSX1-206ENST00000444511 CNGA4Q8IV77 575 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 GLYATL1Q969I3 302 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 TADA1Q96BN2 335 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 SRPK1Q96SB4 655 aaKnown RBP20.78■□□□□ 0.92
VSX1-206ENST00000444511 TSPY26PQ9H489 355 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 PRDM8Q9NQV8 689 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 NFKBIL1Q9UBC1 381 aaPredicted RBP20.78■□□□□ 0.92
VSX1-206ENST00000444511 CPNE7Q9UBL6 633 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 INTUQ9ULD6 942 aa20.78■□□□□ 0.92
VSX1-206ENST00000444511 PMPCBO75439 489 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 NDST3O95803 873 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 COMTP21964 271 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 NOP2P46087 812 aaKnown RBP20.77■□□□□ 0.92
VSX1-206ENST00000444511 NR2C2P49116 596 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 CLCNKAP51800 687 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 CYP4F2P78329 520 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 TFDP2Q14188 446 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 INSCQ1MX18 579 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 ANKS6Q68DC2 871 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 CRTC3Q6UUV7 619 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 ADGRG6Q86SQ4 1221 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 CACNA2D3Q8IZS8 1091 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 RNF214Q8ND24 703 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 TEFMQ96QE5 360 aaKnown RBP20.77■□□□□ 0.92
VSX1-206ENST00000444511 EPB41L1Q9H4G0 881 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 UBP1Q9NZI7 540 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 ADGRG1Q9Y653 693 aa20.77■□□□□ 0.92
VSX1-206ENST00000444511 BPIP17213 487 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 PTPN3P26045 913 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 CDKN2BP42772 138 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 NFATC3Q12968 1075 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 PRKD1Q15139 912 aaPredicted RBP20.76■□□□□ 0.91
VSX1-206ENST00000444511 TCEAL1Q15170 157 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 TBR1Q16650 682 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 PLA2G4EQ3MJ16 856 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 KAZNQ674X7 775 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 ARHGAP22Q7Z5H3 698 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 LRRTM4Q86VH4 590 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 BMPERQ8N8U9 685 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 TFB1MQ8WVM0 346 aaKnown RBP20.76■□□□□ 0.91
VSX1-206ENST00000444511 TEKT5Q96M29 485 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 TBC1D10AQ9BXI6 508 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 SAE1Q9UBE0 346 aaPredicted RBP20.76■□□□□ 0.91
VSX1-206ENST00000444511 KLHL3Q9UH77 587 aa20.76■□□□□ 0.91
VSX1-206ENST00000444511 COL6A6A6NMZ7 2263 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 LILRA5A6NI73 299 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 AKR1B15C9JRZ8 316 aaPredicted RBP20.75■□□□□ 0.91
VSX1-206ENST00000444511 CHUKO15111 745 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 KMOO15229 486 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 SLC28A2O43868 658 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 VEGFDO43915 354 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 RAD1O60671 282 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 CST8O60676 142 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 FAM87AP0C7U9 286 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 TNNT3P45378 269 aaPredicted RBP20.75■□□□□ 0.91
VSX1-206ENST00000444511 MC2RQ01718 297 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 TRIM48Q8IWZ4 208 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 HTR3CQ8WXA8 447 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 PLEKHG4BQ96PX9 1271 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 FAM117AQ9C073 453 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 SPO11Q9Y5K1 396 aa20.75■□□□□ 0.91
VSX1-206ENST00000444511 HEMK1Q9Y5R4 338 aaPredicted RBP20.75■□□□□ 0.91
VSX1-206ENST00000444511 PDZK1P1A8MUH7 402 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 PSTPIP1O43586 416 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 MTX2O75431 263 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 CDK14O94921 469 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 VIPP01282 170 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 SFTPCP11686 197 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 PECAM1P16284 738 aaPredicted RBP20.74■□□□□ 0.91
VSX1-206ENST00000444511 ZNF7P17097 686 aaPredicted RBP20.74■□□□□ 0.91
VSX1-206ENST00000444511 UBE2IP63279 158 aaKnown RBP20.74■□□□□ 0.91
VSX1-206ENST00000444511 LLGL1Q15334 1064 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 CEACAM20Q6UY09 585 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 SPOCD1Q6ZMY3 1216 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 PRICKLE2Q7Z3G6 844 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 PLXDC1Q8IUK5 500 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 RTP4Q96DX8 246 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 CTRCQ99895 268 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 BPIFA1Q9NP55 256 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 SLC23A2Q9UGH3 650 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 FAM153AQ9UHL3 310 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 DNAJC16Q9Y2G8 782 aa20.74■□□□□ 0.91
VSX1-206ENST00000444511 PIEZO2Q9H5I5 2752 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 AURKAO14965 403 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 MTSS1O43312 755 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 LIFP15018 202 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 XRCC1P18887 633 aaPredicted RBP20.73■□□□□ 0.91
VSX1-206ENST00000444511 NFKB1P19838 968 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 WASHC5Q12768 1159 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 SEPT7Q16181 437 aaKnown RBP20.73■□□□□ 0.91
VSX1-206ENST00000444511 TAZQ16635 292 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 GDAP1Q8TB36 358 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 P3H4Q92791 437 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 VPS35Q96QK1 796 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 ZPBPQ9BS86 351 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 TIMM29Q9BSF4 260 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 SLC12A9Q9BXP2 914 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 UCK1Q9HA47 277 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 FBXO8Q9NRD0 319 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms