RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LOC285556D6RIA3 1793 aa4.91□□□□□ -1.62
HMGB3P5-201ENST00000428894 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC15A5A6NIM6 579 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CYSRT1A8MQ03 144 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 PRSS47A8MTI9 375 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 PRAC2D3DTV9 90 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 TULP2O00295 520 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 PEX12O00623 359 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 RGS11O94810 467 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 ASNSP08243 561 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CLTBP09497 229 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CXCR3P49682 368 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 ACSM2AQ08AH3 577 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CCL14Q16627 93 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SETMARQ53H47 684 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 OTUD3Q5T2D3 398 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SHFQ7M4L6 423 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 TMPRSS12Q86WS5 348 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SUGP1Q8IWZ8 645 aaKnown RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CPXM2Q8N436 756 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 USP38Q8NB14 1042 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CNOT9Q92600 299 aaKnown RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 COG8Q96MW5 612 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 CLSTN3Q9BQT9 956 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC32A1Q9H598 525 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 RASSF1Q9NS23 344 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 ERRFI1Q9UJM3 462 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 RABGAP1Q9Y3P9 1069 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 PCDHGB5Q9Y5G0 923 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 ATAD5Q96QE3 1844 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 PLXNA1Q9UIW2 1896 aa4.9□□□□□ -1.63
HMGB3P5-201ENST00000428894 SMCHD1A6NHR9 2005 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ARHGAP10A1A4S6 786 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 SH2D7A6NKC9 451 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 BMPR1BO00238 502 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 KLK10O43240 276 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 HSPA12AO43301 675 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 CEP104O60308 925 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 SOCS5O75159 536 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 PMS2P2O95744 297 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 LDHCP07864 332 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF8P17098 575 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 SRD5A1P18405 259 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 TCEA1P23193 301 aaKnown RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 RYKP34925 604 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 PIGAP37287 484 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 GRK6P43250 576 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 RUNX2Q13950 521 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ANKRD1Q15327 319 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 WDR78Q5VTH9 848 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ANO1Q5XXA6 986 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 MOB3CQ70IA8 216 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF771Q7L3S4 317 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 DZIP1Q86YF9 867 aaKnown RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 FOXP4Q8IVH2 680 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 HERC6Q8IVU3 1022 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 NAGSQ8N159 534 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 RAB40AQ8WXH6 277 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 HERVK_113Q902F9 699 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF385AQ96PM9 386 aaKnown RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 EPYCQ99645 322 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 PORCNQ9H237 461 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 MTIF3Q9H2K0 278 aaKnown RBP4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC28A3Q9HAS3 691 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 CYSLTR2Q9NS75 346 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 MUC6Q6W4X9 2439 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAKO14976 1311 aa4.89□□□□□ -1.63
HMGB3P5-201ENST00000428894 GPR75-ASB3A0A0A6YYF3 556 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 C17orf113A0A1B0GUU1 675 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 VWA3AA6NCI4 1184 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 FAM90A7PA6NKC0 464 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 FAM90A22PA8MWA6 464 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 FAM90A12PA8MX19 464 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 FAM90A23PA8MXZ1 464 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 PER2O15055 1255 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE7O76087 117 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 TIMP1P01033 207 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 CNPP09543 421 aaKnown RBP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE12FP0CL80 117 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE12GP0CL81 117 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE12IP0CL82 117 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 BTDP43251 543 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 TRAPPC10P48553 1259 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 RHBDL3P58872 404 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GSTO1P78417 241 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 TLE2Q04725 743 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE1Q13065 139 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GAGE4Q13068 117 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 PPIGQ13427 754 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 GRB14Q14449 540 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SOWAHAQ2M3V2 549 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 RABL6Q3YEC7 729 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 C10orf62Q5T681 223 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 UNQ6126/PRO20091Q6UXV3 157 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZC3HC1Q86WB0 502 aaKnown RBP4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 SORCS1Q8WY21 1168 aa4.88□□□□□ -1.63
HMGB3P5-201ENST00000428894 CCT6BQ92526 530 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms