RNA–Protein interactions for RNA: ENST00000411034.1

SNORA40.8-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.8-201ENST00000411034 TTC36A6NLP5 189 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EIF4E1BA6NMX2 242 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 KRTAP16-1A8MUX0 517 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 A8MZ25 164 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SMIM1B2RUZ4 78 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 B4E171 279 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EIF3CLB5ME19 914 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 FAM72CH0Y354 149 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 H3BQ06 376 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TMEM178BH3BS89 294 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TMEM189-UBE2V1I3L0A0 370 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 J3KRW8 73 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 J3QR06 171 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PLK4O00444 970 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 DVL1O14640 695 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MAP2K7O14733 419 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 HS3ST1O14792 307 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ATP2A1O14983 1001 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SCAMP1O15126 338 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SMAD9O15198 467 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SLC22A2O15244 555 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 OGG1O15527 345 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 HCRTR2O43614 444 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PLPP2O43688 288 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SYNGR3O43761 229 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EDIL3O43854 480 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SYNCRIPO60506 623 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ZNF217O75362 1048 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 DAB1O75553 588 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SLC25A12O75746 678 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 SEC14L2O76054 403 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PDE9AO76083 593 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TMEM63AO94886 807 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 RTN3O95197 1032 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 IPO7O95373 1038 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 GCNT3O95395 438 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 LDLRP01130 860 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TSHBP01222 138 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EIF2S1P05198 315 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 LIPFP07098 398 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TUBBP07437 444 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PRSS1P07477 247 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 INHBAP08476 426 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 KRT19P08727 400 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ERVK-10P10266 1014 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 RARGP13631 454 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 KRT10P13645 584 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 CSF2RAP15509 400 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 GNB3P16520 340 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ZNF23P17027 643 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 POLR2CP19387 275 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ANXA7P20073 488 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MSH3P20585 1137 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 CBLP22681 906 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MCCP23508 829 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 HRH2P25021 359 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ALDH4A1P30038 563 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TM4SF1P30408 202 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MAPK4P31152 587 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 HOXC8P31273 242 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ELF1P32519 619 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 BSGP35613 385 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 GARSP41250 739 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TSPAN7P41732 249 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PRCPP42785 496 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 NR2C2P49116 596 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 AMPHP49418 695 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 HOXA1P49639 335 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MMP14P50281 582 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MMP15P51511 669 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 CCR9P51686 369 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 THOP1P52888 689 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 RARSP54136 660 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ATP12AP54707 1039 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 DVL1P1P54792 670 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TAS2R40P59535 323 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 CD81P60033 236 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 RPS3AP61247 264 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 GNB1P62873 340 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EEF1A1P68104 462 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 TUBB4BP68371 445 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MRPS34P82930 218 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ZBED6P86452 979 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MPP1Q00013 466 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PLIN5Q00G26 463 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MBTD1Q05BQ5 628 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 NIPAL4Q0D2K0 466 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PNRC1Q12796 327 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 FOXD4Q12950 439 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MAD2L1Q13257 205 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 G3BP1Q13283 466 aaKnown RBP eCLIP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 UBE2V1Q13404 147 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PPIGQ13427 754 aaKnown RBP eCLIP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 ACVR2BQ13705 512 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 PDE1CQ14123 709 aaPredicted RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 EIF4A2Q14240 407 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 MVPQ14764 893 aaKnown RBP0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 KIR2DS3Q14952 304 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 KIR2DS5Q14953 304 aa0.45□□□□□ -2.34
SNORA40.8-201ENST00000411034 FCN2Q15485 313 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms