RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TBCELQ5QJ74 424 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SNX20Q7Z614 316 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CEP97Q8IW35 865 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 MYOCQ99972 504 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 DHRS4Q9BTZ2 278 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RNF38Q9H0F5 515 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 MYO1GB0I1T2 1018 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 NRP2O60462 931 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 STK16O75716 305 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SLC35E2BP0CK96 405 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SLC6A4P31645 630 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 NSG1P42857 185 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SEMA3BQ13214 749 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 MYLK3Q32MK0 819 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RAVER1Q8IY67 606 aaKnown RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 FAM120BQ96EK7 910 aaKnown RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ATG10Q9H0Y0 220 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 TFB2MQ9H5Q4 396 aaKnown RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 COPS7BQ9H9Q2 264 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CIDEBQ9UHD4 219 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CDC7O00311 574 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 B4GALT3O60512 393 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 PRNPP04156 253 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 CTSAP10619 480 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 IMPDH1P20839 514 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ITPKAP23677 461 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 S100A3P33764 101 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 LMAN2Q12907 356 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 TIGD2Q4W5G0 525 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ARSIQ5FYB1 569 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RALGPS1Q5JS13 557 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 OTUD1Q5VV17 481 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ZDHHC20Q5W0Z9 365 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 DSELQ8IZU8 1212 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 NAT14Q8WUY8 206 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 TIFAQ96CG3 184 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 PPP3R2Q96LZ3 170 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SH3GL1Q99961 368 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 BATF3Q9NR55 127 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SNX6Q9UNH7 406 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 MTF2Q9Y483 593 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 A0A0J9YYE9 177 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 MTX2O75431 263 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 OR4F21O95013 312 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RIPK1Q13546 671 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 PITRM1Q5JRX3 1037 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 FAM46CQ5VWP2 391 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 PRMT9Q6P2P2 845 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ZBTB49Q6ZSB9 765 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 ATL1Q8WXF7 558 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 NSMCE2Q96MF7 247 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 HERC2P3Q9BVR0 1158 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 SPAG4Q9NPE6 437 aa13.92□□□□□ -0.18
SCAF4-202ENST00000399804 RPL26L1Q9UNX3 145 aaKnown RBP13.92□□□□□ -0.18
SCAF4-202ENST00000399804 AURKAO14965 403 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 IDO1P14902 403 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 ZNF23P17027 643 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 SLC7A2P52569 658 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 TRIM48Q8IWZ4 208 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 C12orf76Q8N812 135 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 LEMD2Q8NC56 503 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 RIN3Q8TB24 985 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 CEP295NLQ96MC4 621 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 TBCDQ9BTW9 1192 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 LEPRP48357 1165 aaKnown RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 GDPD4Q6W3E5 623 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 CNBD2Q96M20 576 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 TDRD1Q9BXT4 1180 aaKnown RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 SLCO3A1Q9UIG8 710 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 KANSL1LA0AUZ9 987 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 C5orf58C9J3I9 102 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 S1PR4O95977 384 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 ETV4P43268 484 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 PRIM2P49643 509 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 MRPS35P82673 323 aaKnown RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 XKR6Q5GH73 641 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 RSPO2Q6UXX9 243 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 APCDD1Q8J025 514 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 TXNDC5Q8NBS9 432 aaKnown RBP13.91□□□□□ -0.18
SCAF4-202ENST00000399804 FIG4Q92562 907 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 IRF7Q92985 503 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 MKS1Q9NXB0 559 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
SCAF4-202ENST00000399804 DRGXA6NNA5 263 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 MGRN1O60291 552 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 DDX5P17844 614 aaKnown RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 HERVK_113P63132 956 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 TRAF2Q12933 501 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 AP5B1Q2VPB7 878 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms