RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SERPINB6P35237 376 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 GJC1P36383 396 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 OR1G1P47890 313 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 VPS41P49754 854 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 CLCN3P51790 818 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 HAND2P61296 217 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 GAD2Q05329 585 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ACSM1Q08AH1 577 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ALKBH1Q13686 389 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 GALNT3Q14435 633 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 RNPS1Q15287 305 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 DLG2Q15700 870 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 DPYSL2Q16555 572 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TBR1Q16650 682 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 SPATA46Q5T0L3 261 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 RARS2Q5T160 578 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 STRIP1Q5VSL9 837 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM211Q6ICI0 200 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TAPT1Q6NXT6 567 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 CES3Q6UWW8 571 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM108Q6UXF1 575 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 C11orf57Q6ZUT1 292 aaPredicted RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ATG9AQ7Z3C6 839 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 BNIPLQ7Z465 357 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 CUZD1Q86UP6 607 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 SLC15A3Q8IY34 581 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 CCDC13Q8IYE1 715 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 EIF1ADQ8N9N8 165 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 L3MBTL4Q8NA19 623 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 EXT2Q93063 718 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ST6GALNAC6Q969X2 333 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 DTD2Q96FN9 168 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 SMOQ99835 787 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 H2AFJQ9BTM1 129 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 B3GNT4Q9C0J1 378 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM117Q9H0C3 514 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 SMOC2Q9H3U7 446 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 FZD8Q9H461 694 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 RMND5AQ9H871 391 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 LRRC40Q9H9A6 602 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 RNPEPL1Q9HAU8 725 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ASAH2Q9NR71 780 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 PNPLA3Q9NST1 481 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 BABAM1Q9NWV8 329 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 DDX25Q9UHL0 483 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 EXO1Q9UQ84 846 aaKnown RBP4.96□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF148Q9UQR1 794 aa4.96□□□□□ -1.62
GABPB1-204ENST00000396464 TRIM49BA6NDI0 452 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FAM47DPA6NHR8 397 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ARHGAP42A6NI28 874 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 USP17L23D6RBM5 183 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PLK4O00444 970 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF213O14771 459 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CLDN3O15551 220 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SELENOFO60613 162 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 OR6B1O95007 311 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 POMCP01189 267 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM225BP0DP42 221 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FUT1P19526 365 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SFPQP23246 707 aaKnown RBP eCLIP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ACP1P24666 158 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 EPHA3P29320 983 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CXCR5P32302 372 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CDAP32320 146 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RDXP35241 583 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CDKN1AP38936 164 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ARHGAP25P42331 645 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PTPN9P43378 593 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ADCY7P51828 1080 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 VCPP55072 806 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CDH13P55290 713 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RBPJQ06330 500 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 OLIG2Q13516 323 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 UBXN2BQ14CS0 331 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZMYND11Q15326 602 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 STK11Q15831 433 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 UGP2Q16851 508 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 KRT71Q3SY84 523 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SERTAD4-AS1Q5TG53 156 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 TMEM198Q66K66 360 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 GRHL2Q6ISB3 625 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RGS7BPQ6MZT1 257 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 WDR88Q6ZMY6 472 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 MACC1Q6ZN28 852 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SEPT14Q6ZU15 432 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 MOB3CQ70IA8 216 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ADIPOR2Q86V24 386 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF573Q86YE8 665 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RASAL3Q86YV0 1011 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SCYL3Q8IZE3 742 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CFAP52Q8N1V2 620 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FITM2Q8N6M3 262 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 BBOF1Q8ND07 529 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 NSUN7Q8NE18 718 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SETD9Q8NE22 299 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SLC24A4Q8NFF2 622 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 OR5M3Q8NGP4 307 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FAM110DQ8TAY7 271 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ELP5Q8TE02 316 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms