RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CASKO14936 926 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 KPNA5O15131 536 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 BMP7P18075 431 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 NMBRP28336 390 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 AIF1P55008 147 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 RUNDC3AQ59EK9 446 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 HLA-DQA1Q5Y7H0 255 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 RASAL3Q86YV0 1011 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 TOP6BLQ8N6T0 577 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 AGAP2Q99490 1192 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 APOBEC3GQ9HC16 384 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 RCOR3Q9P2K3 495 aaPredicted RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 UBE2QL1A1L167 161 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 H0Y858 1186 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ACADMP11310 421 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 PKMP14618 531 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ACLYP53396 1101 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 HADHBP55084 474 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 FAM182AQ5T1J6 154 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 TMEM214Q6NUQ4 689 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ESRP1Q6NXG1 681 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 UBE2Q1Q7Z7E8 422 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 FSTL5Q8N475 847 aaPredicted RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 GPR21Q99679 349 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 MRPL9Q9BYD2 267 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 LRTM1Q9HBL6 345 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 FETUBQ9UGM5 382 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 NDOR1Q9UHB4 597 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 CNOT6Q9ULM6 557 aaKnown RBP16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 TBX1O43435 398 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ITM2AO43736 263 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 GRIN3BO60391 1043 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 DHFRP00374 187 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 SCN1BQ07699 218 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 CYP1B1Q16678 543 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 OGFOD2Q6N063 350 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 TMCO6Q96DC7 493 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ST3GAL5Q9UNP4 418 aa16.36■□□□□ 0.21
SH3RF1-201ENST00000284637 ELOVL7A1L3X0 281 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ADAMTS3O15072 1205 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 GCATO75600 419 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ALDH4A1P30038 563 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 SPATA31D1Q6ZQQ2 1576 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 RASSF6Q6ZTQ3 369 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ZFP28Q8NHY6 868 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 NSMCE3Q96MG7 304 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 FAIM2Q9BWQ8 316 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MCUBQ9NWR8 336 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 TMEM9Q9P0T7 183 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 RPP40O75818 363 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MT-CYBP00156 380 aaPredicted RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 CXCR2P25025 360 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 RPL3P39023 403 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MAPK8P45983 427 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 RAET1GQ6H3X3 334 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 DCLRE1AQ6PJP8 1040 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 TEX47Q8TBZ9 253 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 GBA3Q9H227 469 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ZFYVE1Q9HBF4 777 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 PFDN2Q9UHV9 154 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 TOR1BO14657 336 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 SERPINB7O75635 380 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 TRBC1P01850 177 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 COL6A1P12109 1028 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MRPS6P82932 125 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 SFT2D3Q587I9 215 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 CPTPQ5TA50 214 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 XKR5Q6UX68 686 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 UBE2R2Q712K3 238 aaPredicted RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 GPR65Q8IYL9 337 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 C12orf43Q96C57 262 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 PPCDCQ96CD2 204 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 PRMT5O14744 637 aaPredicted RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MDM4O15151 490 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MYL9P24844 172 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 RPL4P36578 427 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 KIR3DL1P43629 444 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 CLCQ05315 142 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 PABPC1LQ4VXU2 614 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 DCAF12L1Q5VU92 463 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 OR52J3Q8NH60 311 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 AARSD1Q9BTE6 412 aaKnown RBP16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 MUC13Q9H3R2 512 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 NKIRAS2Q9NYR9 191 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 FBXO10Q9UK96 956 aa16.35■□□□□ 0.21
SH3RF1-201ENST00000284637 A0A0J9YVX5 310 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 CHURC1-FNTBB4DL54 471 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 SLC28A2O43868 658 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 UGT2B4P06133 528 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 GPIP06744 558 aa16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 HOXB6P17509 224 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 AZGP1P25311 298 aaKnown RBP16.34■□□□□ 0.21
SH3RF1-201ENST00000284637 SMAD3P84022 425 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms