RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 OAZ2O95190 189 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PLEKHA8P1O95397 391 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CBX6O95503 412 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 WEE2P0C1S8 567 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 HOXB2P14652 356 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CSF2RAP15509 400 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 UBA1P22314 1058 aaKnown RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PSMA5P28066 241 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 HOXA13P31271 388 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 HOXC8P31273 242 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PTPN9P43378 593 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CLCNKBP51801 687 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PSMC6P62333 389 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 BIRC3Q13489 604 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 NEDD9Q14511 834 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 HSDL1Q3SXM5 330 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CELF3Q5SZQ8 465 aaKnown RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 NAPEPLDQ6IQ20 393 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TMEM71Q6P5X7 295 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 METTL7BQ6UX53 244 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CYP26C1Q6V0L0 522 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 SEPT14Q6ZU15 432 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TRIM74Q86UV6 250 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TRIM73Q86UV7 250 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZNF354CQ86Y25 554 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CPOQ8IVL8 374 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 DEFB123Q8N688 67 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 GABPB2Q8TAK5 448 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 STAMQ92783 540 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 SH3KBP1Q96B97 665 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CDHR1Q96JP9 859 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CAMK1GQ96NX5 476 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 CTAGE1Q96RT6 745 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 C16orf70Q9BSU1 422 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TM6SF1Q9BZW5 370 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 GLT8D2Q9H1C3 349 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TRPV6Q9H1D0 765 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 MTIF3Q9H2K0 278 aaKnown RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 STN1Q9H668 368 aaKnown RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 TTC12Q9H892 705 aaPredicted RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PSTPIP2Q9H939 334 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 GRHL1Q9NZI5 618 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 NLKQ9UBE8 527 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 SUFUQ9UMX1 484 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 UBIAD1Q9Y5Z9 338 aa3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 PRRC2BQ5JSZ5 2229 aaKnown RBP3.8□□□□□ -1.8
CKS1BP3-201ENST00000600888 NFASCO94856 1347 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 UMODL1Q5DID0 1318 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 COL4A6Q14031 1691 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 RPS10-NUDT3A0A1W2PQS6 291 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 C17orf102A2RUQ5 167 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 SH2D7A6NKC9 451 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 PEX12O00623 359 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 HSPB6O14558 160 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 KIF1CO43896 1103 aaKnown RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 HBP1O60381 514 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 EIF5BO60841 1220 aaKnown RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 BAIAP3O94812 1187 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 GGPS1O95749 300 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 CXCL10P02778 98 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 IQCF3P0C7M6 154 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 CHRNB2P17787 502 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 DPP6P42658 865 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 FOXG1P55316 489 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 TMPRSS3P57727 454 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 SELENOVP59797 346 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 UBE3AQ05086 875 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 TBL3Q12788 808 aaKnown RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 TAF12Q16514 161 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 PTGISQ16647 500 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 DUSP6Q16828 381 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 FBXO43Q4G163 708 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 WDR45BQ5MNZ6 344 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZNF549Q6P9A3 640 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 BLOC1S2Q6QNY1 142 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 C9orf47Q6ZRZ4 202 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 FAM43BQ6ZT52 329 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 BBS12Q6ZW61 710 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 NIPA1Q7RTP0 329 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 RPAINQ86UA6 219 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZDHHC23Q8IYP9 409 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 PELI3Q8N2H9 469 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 HORMAD2Q8N7B1 307 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 C7orf57Q8NEG2 295 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 PHOSPHO2Q8TCD6 241 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 BICD2Q8TD16 824 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 AFAP1L1Q8TED9 768 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 ASB5Q8WWX0 329 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 CRYGNQ8WXF5 182 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 URB1-AS1Q96HZ7 61 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 UBXN10Q96LJ8 280 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 SPATA33Q96N06 139 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 POLDIP3Q9BY77 421 aaKnown RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 LRRC2Q9BYS8 371 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 ZMYND12Q9H0C1 365 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 TTYH1Q9H313 450 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 EBF3Q9H4W6 596 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 CXorf56Q9H5V9 222 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 BARHL2Q9NY43 387 aa3.79□□□□□ -1.8
CKS1BP3-201ENST00000600888 SEL1LQ9UBV2 794 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms