RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OR2AG1Q9H205 316 aa17.11■□□□□ 0.33
SHKBP1-212ENST00000596163 EIF2B3Q9NR50 452 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-212ENST00000596163 SIRPGQ9P1W8 387 aa17.11■□□□□ 0.33
SHKBP1-212ENST00000596163 ATXN10Q9UBB4 475 aa17.11■□□□□ 0.33
SHKBP1-212ENST00000596163 SPTBN2O15020 2390 aa17.11■□□□□ 0.33
SHKBP1-212ENST00000596163 LY6G6EA0A0G2JKS1 128 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 CTAGE9A4FU28 777 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 GRID2O43424 1007 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 CDK14O94921 469 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 APRTP07741 180 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 ZSCAN5DPP0CG00 497 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 TPH1P17752 444 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 COILP38432 576 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 ACTR1BP42025 376 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 ACTR1AP61163 376 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 BASP1P80723 227 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 SMAD1Q15797 465 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 SLC30A9Q6PML9 568 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 ADGRG6Q86SQ4 1221 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 NRROSQ86YC3 692 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 GPR156Q8NFN8 814 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 OR52K1Q8NGK4 314 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 CCL4L1Q8NHW4 92 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 WDR48Q8TAF3 677 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 GRK7Q8WTQ7 553 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 STYXQ8WUJ0 223 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 ULK4Q96C45 1275 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 KCND1Q9NSA2 647 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 SMOXQ9NWM0 555 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 TAAR2Q9P1P5 351 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 WASF3Q9UPY6 502 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 MSRB2Q9Y3D2 182 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 U3KQA8 63 aa17.1■□□□□ 0.33
SHKBP1-212ENST00000596163 KMOO15229 486 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 ZW10O43264 779 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A9O60656 530 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 PRAMEF1O95521 474 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 MYF5P13349 255 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 JUPP14923 745 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 ZNF8P17098 575 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A6P19224 532 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A1P22309 533 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A4P22310 534 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A3P35503 534 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A5P35504 534 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 SARNPP82979 210 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 CDK16Q00536 496 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 TMEM115Q12893 351 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 BIRC2Q13490 618 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 SEPT6Q14141 434 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 POU6F1Q14863 301 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 SKIDA1Q1XH10 827 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 C14orf28Q4W4Y0 310 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 PAPD7Q5XG87 772 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 CHST15Q7LFX5 561 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 LRRTM4Q86VH4 590 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 CACTIN-AS1Q8N1I8 211 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 GLIS1Q8NBF1 620 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 MAPK15Q8TD08 544 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 ZDHHC1Q8WTX9 485 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 HEXDCQ8WVB3 486 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 ASB8Q9H765 288 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A7Q9HAW7 530 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A10Q9HAW8 530 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 UGT1A8Q9HAW9 530 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 FKBPLQ9UIM3 349 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 KCTD3Q9Y597 815 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 SAR1BQ9Y6B6 198 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 SLC30A1Q9Y6M5 507 aa17.09■□□□□ 0.33
SHKBP1-212ENST00000596163 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 B4DGG1 531 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 CHUKO15111 745 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 LDB2O43679 373 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 OPA1O60313 960 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 KCNJ13O60928 360 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 PHF2O75151 1096 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 TOP3BO95985 862 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 KRT14P02533 472 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 SLC2A4P14672 509 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 GLB1P16278 677 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 VCLP18206 1134 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 MSH3P20585 1137 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 ITGALP20701 1170 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 FNTAP49354 379 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 ZNF140P52738 457 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 TMPRSS15P98073 1019 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 PTPRCAPQ14761 206 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 GUSBP11Q6P575 273 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 KYQ8NBH2 561 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 DDHD1Q8NEL9 900 aa17.08■□□□□ 0.32
SHKBP1-212ENST00000596163 OR13C4Q8NGS5 318 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms