RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 OR1I1O60431 355 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 WISP3O95389 354 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 SOD1P00441 154 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 MPOP05164 745 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 BRAFP15056 766 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CD9P21926 228 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 FDXRP22570 491 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 HPDP32754 393 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 PPARGP37231 505 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 PDE1CQ14123 709 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 ZNF284Q2VY69 593 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CTSL3PQ5NE16 218 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 HECTD2Q5U5R9 776 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 KIAA1161Q6NSJ0 714 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 FAM45BPQ6NSW5 357 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 NEK5Q6P3R8 708 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CLEC14AQ86T13 490 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 SLC41A1Q8IVJ1 513 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CEP97Q8IW35 865 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 PELI3Q8N2H9 469 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 GPATCH11Q8N954 259 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 FAM45AQ8TCE6 357 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 GANCQ8TET4 914 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 ASB12Q8WXK4 309 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 APOPT1Q96IL0 206 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 ELMO2Q96JJ3 720 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 NDNQ99608 321 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 OLFM1Q99784 485 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 C1QTNF2Q9BXJ5 285 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 KDM4CQ9H3R0 1056 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CD93Q9NPY3 652 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 ITM2CQ9NQX7 267 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CNOT6Q9ULM6 557 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 SMG5Q9UPR3 1016 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 NCKAP1Q9Y2A7 1128 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 CRYL1Q9Y2S2 319 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 MED16Q9Y2X0 877 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 VWA7Q9Y334 891 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 COMMD10Q9Y6G5 202 aa14.62□□□□□ -0.07
SHKBP1-211ENST00000595945 GON4LQ3T8J9 2241 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 GOLGA8RI6L899 631 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 PRMT5O14744 637 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 RNGTTO60942 597 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 PCDH8O95206 1070 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 ACADMP11310 421 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 PKMP14618 531 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 ZNF7P17097 686 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 TYK2P29597 1187 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 FMO4P31512 558 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 TPMTP51580 245 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 CDKN2DP55273 166 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 RAB10P61026 200 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 RPS21P63220 83 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 B4GALNT1Q00973 533 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 USP10Q14694 798 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 MAP7D1Q3KQU3 841 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 SETMARQ53H47 684 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 GPRC6AQ5T6X5 926 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 SEL1L3Q68CR1 1132 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 HORMAD1Q86X24 394 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 RBFAQ8N0V3 343 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 DDHD1Q8NEL9 900 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 FLCNQ8NFG4 579 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 OR14C36Q8NHC7 312 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 DENND1AQ8TEH3 1009 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 BTN2A2Q8WVV5 523 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 HMGB4Q8WW32 186 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 TSPAN17Q96FV3 270 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 CABS1Q96KC9 395 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 TTC1Q99614 292 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 BOCQ9BWV1 1114 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 CNOT10Q9H9A5 744 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 POPDC3Q9HBV1 291 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 PCDHB1Q9Y5F3 818 aa14.61□□□□□ -0.07
SHKBP1-211ENST00000595945 UBA6A0AVT1 1052 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 TMEM120BA0PK00 339 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 SPAG7O75391 227 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 TM7SF2O76062 418 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 ESR1P03372 595 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 C2P06681 752 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 SLC35E2BP0CK96 405 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 TEAD1P28347 426 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 CRABP2P29373 138 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 CRHR1P34998 444 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 FGL2Q14314 439 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 INSCQ1MX18 579 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 PPM1JQ5JR12 505 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 CDHR3Q6ZTQ4 885 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 TSTD1Q8NFU3 115 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 GLYATL1Q969I3 302 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 NECAB3Q96P71 396 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 COPS8Q99627 209 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 SELENOSQ9BQE4 189 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 IER2Q9BTL4 223 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 C1QTNF1Q9BXJ1 281 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 SGK2Q9HBY8 427 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
SHKBP1-211ENST00000595945 ANKRD6Q9Y2G4 727 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms