RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 KDM1BQ8NB78 822 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ATAD1Q8NBU5 361 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CALML6Q8TD86 181 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 EME1Q96AY2 570 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ZNF419Q96HQ0 510 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 FAM193BQ96PV7 902 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 IL12RB2Q99665 862 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 OLFM1Q99784 485 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PCDHAC1Q9H158 963 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 EML4Q9HC35 981 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 UXTQ9UBK9 157 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 DSEQ9UL01 958 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PSMD12O00232 456 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 SDHDO14521 159 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 AXIN1O15169 862 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 AHCYL1O43865 530 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CNTN5O94779 1100 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 HAPLN1P10915 354 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 GFAPP14136 432 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 POU4F1Q01851 419 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 BTKQ06187 659 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 MSLNQ13421 630 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 ZNF235Q14590 738 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 NRF1Q16656 503 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PPP1R3AQ16821 1122 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 HECTD2Q5U5R9 776 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 KIAA0930Q6ICG6 404 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 GLB1LQ6UWU2 654 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SCD5Q86SK9 330 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ADGRG6Q86SQ4 1221 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CUZD1Q86UP6 607 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PIM3Q86V86 326 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 KBTBD6Q86V97 674 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 APLFQ8IW19 511 aaPredicted RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 PGAM4Q8N0Y7 254 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 OR9I1Q8NGQ6 314 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 PDCD6IPQ8WUM4 868 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 PSMG2Q969U7 264 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 NMD3Q96D46 503 aaKnown RBP5.35□□□□□ -1.55
VAPA-203ENST00000577539 TSPAN17Q96FV3 270 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 TBATAQ96M53 351 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 SERPINB11Q96P15 392 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 TSGA13Q96PP4 275 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 HAPLN3Q96S86 360 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CENPOQ9BU64 300 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 CCDC28BQ9BUN5 200 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 NACA2Q9H009 215 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 ZCWPW1Q9H0M4 648 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 RGS18Q9NS28 235 aa5.35□□□□□ -1.55
VAPA-203ENST00000577539 LRRC37A2A6NM11 1700 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 BRCA1P38398 1863 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 A0A087X1B8 175 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 C15orf38-AP3S2A0A0A6YYH1 394 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MYOCOSA0A1B0GUC4 107 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SLC12A8A0AV02 714 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 A8MT66 165 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 PEX1O43933 1283 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 TPST1O60507 370 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 TADA2AO75478 443 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 IPO13O94829 963 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 RBP1P09455 135 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 NELFEP18615 380 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 ARCN1P48444 511 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 CHN2P52757 468 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MLLT6P55198 1093 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 STX5Q13190 355 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 LIN52Q52LA3 116 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 PITRM1Q5JRX3 1037 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 TSTD2Q5T7W7 516 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 PSAPL1Q6NUJ1 521 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 CFAP161Q6P656 301 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 ARPINQ7Z6K5 226 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 ATP6V1E2Q96A05 226 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SEPT5Q99719 369 aaPredicted RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 SEMA3CQ99985 751 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 ZBTB26Q9HCK0 441 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 FBRSL1Q9HCM7 1045 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 CSNK1G1Q9HCP0 422 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 VWA7Q9Y334 891 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SNX13Q9Y5W8 968 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 AP4B1Q9Y6B7 739 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 LOC285556D6RIA3 1793 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 ARHGEF37A1IGU5 675 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 FAM86C2PA6NEL3 165 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MRASO14807 208 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 MAN1A2O60476 641 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 AOC2O75106 756 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 DUSP11O75319 330 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 FESP07332 822 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 YWHAQP27348 245 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 CASP2P42575 452 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 CLCN5P51795 746 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 SULT2A1Q06520 285 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 GALNT3Q14435 633 aa5.34□□□□□ -1.55
VAPA-203ENST00000577539 RBBP5Q15291 538 aaKnown RBP5.34□□□□□ -1.55
VAPA-203ENST00000577539 TOMM20Q15388 145 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms