RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 MAP4P27816 1152 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 HMGCLP35914 325 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 HALP42357 657 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 CDKN2BP42772 138 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PDX1P52945 283 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PDE1BQ01064 536 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 CLN3Q13286 438 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 MPP3Q13368 585 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PTPRRQ15256 657 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PCSK7Q16549 785 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 INSCQ1MX18 579 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KAZNQ674X7 775 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KCTD16Q68DU8 428 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 ITPRIPL1Q6GPH6 555 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KLHL35Q6PF15 583 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 MFSD7Q6UXD7 560 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 DAAM2Q86T65 1068 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 LRRTM4Q86VH4 590 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 TMTC1Q8IUR5 882 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 RBM12BQ8IXT5 1001 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KATNAL2Q8IYT4 538 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SFRP1Q8N474 314 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 IL22RA1Q8N6P7 574 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 GPR26Q8NDV2 337 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 GDAP1Q8TB36 358 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SLC37A2Q8TED4 501 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 NCSTNQ92542 709 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 GLYATL1Q969I3 302 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SGF29Q96ES7 293 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 MED8Q96G25 268 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 ZNF514Q96K75 400 aaPredicted RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 OLFM3Q96PB7 478 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 FCRL5Q96RD9 977 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 AGAP2Q99490 1192 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 DDA1Q9BW61 102 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 FSD1LQ9BXM9 530 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SEMA6CQ9H3T2 930 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 UCK1Q9HA47 277 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 FBXO8Q9NRD0 319 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KLC4Q9NSK0 619 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SLC39A1Q9NY26 324 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 KLHL8Q9P2G9 620 aaPredicted RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PDP2Q9P2J9 529 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 ATXN10Q9UBB4 475 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 NFKBIL1Q9UBC1 381 aaPredicted RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 CPNE7Q9UBL6 633 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 CNOT6Q9ULM6 557 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 SHOC2Q9UQ13 582 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 EFR3BQ9Y2G0 817 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 AAR2Q9Y312 384 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PCDHGA3Q9Y5H0 932 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PCDHA13Q9Y5I0 950 aa6.45□□□□□ -1.38
FOXN3-205ENST00000553904 EPN1Q9Y6I3 576 aaPredicted RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 MAP1BP46821 2468 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 URB1O60287 2271 aaKnown RBP6.45□□□□□ -1.38
FOXN3-205ENST00000553904 PRAMEF33A0A0G2JMD5 474 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 A0A0U1RQS6 177 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 LOC285095A0A1B0GVY8 99 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 A0A1W2PNU3 283 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 CCDC66A2RUB6 948 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 GOLGA6L9A6NEM1 432 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 C5orf60A6NFR6 353 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 FADS2P1A8MWK0 482 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 B4E171 279 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 H7C0C1 242 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 CHUKO15111 745 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TOX3O15405 576 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 PRAMEF10O60809 474 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TJP3O95049 919 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 LCA5LO95447 670 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 MT-CYBP00156 380 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 SOD1P00441 154 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 PYGMP11217 842 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 FGF3P11487 239 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ACP5P13686 325 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 HGFP14210 728 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ZNF7P17097 686 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ZNF8P17098 575 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ITIH1P19827 911 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 PTPN3P26045 913 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TSPAN7P41732 249 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ATP5OP48047 213 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 GEMP55040 296 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 WNT3AP56704 352 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TMEM115Q12893 351 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ZBTB17Q13105 803 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TBX2Q13207 712 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 NFATC2Q13469 925 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ITGA9Q13797 1035 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 GALNT3Q14435 633 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 PRKD1Q15139 912 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 PPP2R5EQ16537 467 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 TAZQ16635 292 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 LDLRAP1Q5SW96 308 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.44□□□□□ -1.38
FOXN3-205ENST00000553904 NKAIN2Q5VXU1 208 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 C11orf63Q6NUN7 778 aa6.44□□□□□ -1.38
FOXN3-205ENST00000553904 ZNF449Q6P9G9 518 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms