RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CERCAMQ5T4B2 595 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ANKRD20A1Q5TYW2 823 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ANKRD20A3Q5VUR7 823 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 PDPK2PQ6A1A2 396 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ITPRIPL1Q6GPH6 555 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 AADACL2Q6P093 401 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SLC30A9Q6PML9 568 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 MARK2Q7KZI7 788 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRIM74Q86UV6 250 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LSMEM2Q8N112 164 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ARL14Q8N4G2 192 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SLC25A41Q8N5S1 370 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRAM1L1Q8N609 369 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GPR26Q8NDV2 337 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OXNAD1Q96HP4 312 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HES6Q96HZ4 224 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OR2M4Q96R27 311 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 GFM1Q96RP9 751 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ZSCAN5AQ9BUG6 496 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TSGA10Q9BZW7 698 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 LRRN3Q9H3W5 708 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 TRIM39Q9HCM9 518 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 HACD3Q9P035 362 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 VPS18Q9P253 973 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 NFKBIL1Q9UBC1 381 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RSPH14Q9UHP6 348 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 SPO11Q9Y5K1 396 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 ENTPD2Q9Y5L3 495 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 OAS3Q9Y6K5 1087 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RNF215Q9Y6U7 377 aa9.65□□□□□ -0.86
TNFRSF1A-214ENST00000543048 RHPN2P1A8MT19 583 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 F5H423 210 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AURKAO14965 403 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KCNN4O15554 427 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GRID2O43424 1007 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KRT86O43790 486 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 NUAK1O60285 661 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BRINP1O60477 761 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DNAJC6O75061 913 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ECEL1O95672 775 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FTCDO95954 541 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AGTP01019 485 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RPLP0P05388 317 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BPIP17213 487 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 HLA-DPA1P20036 260 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 HMGCLP35914 325 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ACTR1BP42025 376 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DCDC1P59894 354 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ACTR1AP61163 376 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 LRP8Q14114 963 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PRPSAP1Q14558 356 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC1A5Q15758 541 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZDHHC20Q5W0Z9 365 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ALS2CLQ60I27 953 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CCNJLQ8IV13 435 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SFTPA2Q8IWL1 248 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IPMKQ8NFU5 416 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FGF11Q92914 225 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ATXN7L3BQ96GX2 97 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FAM118BQ9BPY3 351 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GBA3Q9H227 469 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CARD9Q9H257 536 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 POLR1BQ9H9Y6 1135 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BPIFA1Q9NP55 256 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ATXN10Q9UBB4 475 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GUCA1BQ9UMX6 200 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PACSIN2Q9UNF0 486 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZKSCAN5Q9Y2L8 839 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AAR2Q9Y312 384 aaKnown RBP9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ST14Q9Y5Y6 855 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
TNFRSF1A-214ENST00000543048 FAM208BQ5VWN6 2430 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 A0A1W2PQM1 296 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 C5orf60A6NFR6 353 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CASC3O15234 703 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 B4GAT1O43505 415 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SLC4A1P02730 911 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 MPOP05164 745 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CD46P15529 392 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RBMS1P29558 406 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GPR3P46089 330 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GCGRP47871 477 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 GABREP78334 506 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 B4GALNT1Q00973 533 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BIRC2Q13490 618 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF569Q5MCW4 686 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 RANBP10Q6VN20 620 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CHST15Q7LFX5 561 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ADGRG6Q86SQ4 1221 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 NAGSQ8N159 534 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TTC30BQ8N4P2 665 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 WDR36Q8NI36 951 aaKnown RBP9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DTX3LQ8TDB6 740 aa9.63□□□□□ -0.87
TNFRSF1A-214ENST00000543048 BRSK1Q8TDC3 778 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms