RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 C1orf61Q13536 156 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 GALNT3Q14435 633 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 NR0B2Q15466 257 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TCEA2Q15560 299 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 P3H1Q32P28 736 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TAF1BQ53T94 588 aaPredicted RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 PRRT3Q5FWE3 981 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 ALG1LQ6GMV1 187 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 RBM44Q6ZP01 1051 aaKnown RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SLC35F3Q8IY50 421 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SLC25A41Q8N5S1 370 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 DENND6BQ8NEG7 585 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 RAB7BQ96AH8 199 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 CENPTQ96BT3 561 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 RTP4Q96DX8 246 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SLC46A1Q96NT5 459 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 FCRL5Q96RD9 977 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 TRIM51Q9BSJ1 452 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 LRRC61Q9BV99 259 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 BOCQ9BWV1 1114 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 RAB17Q9H0T7 212 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 ETNK1Q9HBU6 452 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 EVA1BQ9NVM1 165 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 APOBEC3BQ9UH17 382 aaKnown RBP9.37□□□□□ -0.91
VPS26B-207ENST00000532160 SPTA1P02549 2419 aa9.37□□□□□ -0.91
VPS26B-207ENST00000532160 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 FAM187AA6NFU0 413 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 LMO7DNF2Z398 122 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TPP1O14773 563 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 RAD51CO43502 376 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 MMP20O60882 483 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 SHOX2O60902 331 aaPredicted RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 SYF2O95926 243 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 AGTP01019 485 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PRLP01236 227 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 ALPIP09923 528 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PIRTP0C851 137 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TIMP2P16035 220 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 UCNP55089 124 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 HNRNPH2P55795 449 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 EIF3BP55884 814 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 WNT3AP56704 352 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 BASP1P80723 227 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 DR1Q01658 176 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 RHDQ02161 417 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 GPS1Q13098 491 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 LY6DQ14210 128 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PPP1R7Q15435 360 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PARP6Q2NL67 630 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 ARMC12Q5T9G4 340 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 IGF2-ASQ6U949 168 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 KDELC1Q6UW63 502 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TTC7BQ86TV6 843 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 JAMLQ86YT9 394 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PHACTR4Q8IZ21 702 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 LPCAT1Q8NF37 534 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 ASB12Q8WXK4 309 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TTC9Q92623 222 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TADA1Q96BN2 335 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 MRGPRX2Q96LB1 330 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TUBGCP5Q96RT8 1024 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 CCDC3Q9BQI4 270 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 FICDQ9BVA6 458 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TDRD1Q9BXT4 1180 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 DPH1Q9BZG8 443 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 TRIM31Q9BZY9 425 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 CLPBQ9H078 707 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PCDH9Q9HC56 1237 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 MBNL1Q9NR56 388 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 HAUS2Q9NVX0 235 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PIH1D1Q9NWS0 290 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 NCKIPSDQ9NZQ3 722 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 PAK5Q9P286 719 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 SPASTQ9UBP0 616 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 FAM153AQ9UHL3 310 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 UTP11Q9Y3A2 253 aaKnown RBP9.36□□□□□ -0.91
VPS26B-207ENST00000532160 NEU2Q9Y3R4 380 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 ANKRD36A6QL64 1941 aa9.36□□□□□ -0.91
VPS26B-207ENST00000532160 MAST4O15021 2626 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 SCN8AQ9UQD0 1980 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 ARHGEF17Q96PE2 2063 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 TLN1Q9Y490 2541 aaKnown RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 TCRBV7S3A2A0A539 114 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 YY2O15391 372 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 HTRA2O43464 458 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 FZD6O60353 706 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 TCEA3O75764 348 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 HEXIM1O94992 359 aaKnown RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 PGLSO95336 258 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 GAS8O95995 478 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 CPP00450 1065 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 TSHRP16473 764 aa9.35□□□□□ -0.91
VPS26B-207ENST00000532160 XPAP23025 273 aaPredicted RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
VPS26B-207ENST00000532160 THOP1P52888 689 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms